Gene MmarC6_1470 details

Gene Information

• Locus tag: MmarC6_1470
• Symbol: cbiD
• ID: 5737515
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 1372422
• End bp: 1373519
• Gene Length: 1098 bp
• Protein Length: 365 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 641283971
• Product: cobalt-precorrin-6A synthase
• Protein accession: YP_001549515
• Protein GI: 159905853
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1903] Cobalamin biosynthesis protein CbiD
• TIGRFAM ID: [TIGR00312] cobalamin biosynthesis protein CbiD

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCAAGA TTGATTTTAG ACTCGAAAAG ACGTTTGGAT ACACTACTGG TGCATGTGCT 
GCTGCTGGCG CATATTCTGC ACTATATTTT TTAAAAAATA ACGAAAAGTT AAATTTTGTT 
GAAATTTTAA ATTTAAAAGG CGATTCTTTA ATTATTCCAA TTAAAAACAT CGAAAAACGG 
GGAAACACTG CAGTTTCAAC AGTTGAGAAG TTTGCTGGTG AAGACATTGA TATCACAAAT 
GGAATGGATA TCAAAATAGA GGTTATTCTT GAAAATTGGG ATGATGGCTA TCCAAAACCA 
AGCAACGTAA TAATTATTGG GGGGACTGGT GTCGGACTTA TTACAAAATC AGGTTTACAG 
ATAAAACCTG GGGATCATGC AATAAACCCA AAACCAAGAG AAATGATTGA AACTAATTTA 
AAATCCCTTT TAAAAGATGA TGAATATGTA ACTGTAAAAA TTTCAGTTCC AACTGGGGAT 
GAAATTGCTA AAAAAACATT AAATCCAAAA TTGGGAATAG TTGGCGGAAT TTCAATTCTT 
GGAACTACTG GAATCGTTCG TCCAATGTCA AATGAAGCTT ACAAAGAGTC CCTTGCACCT 
CAAATTGATG TAGCTTTAGC AAATAATTTT GAAAATTTGA TATTTGTTCC AGGAAATATT 
GGAACAAAAC ATGCTAAAAT CTTATTGAAT GCAGAAGAAG ACCAAATTAT CGAAGTTTCA 
AATTTTTGGG ATTACATGCT CGATAAAGCA AAAGAAAAAG GCGTTAAAGA TATAATGGTC 
TTTGGACACG CTGGAAAAAT TGTAAAACTT GCAGGGGGAA TTTTTGACAC CCATTCAAGA 
GTTGCGGATG CTAGAAACGA AATACTCTGC GCATATGCTT CATTGGTATC CCAAGATGTA 
GAAATGCTTC AAAAAATACT TCAATCGAAC ACAACTGAAG ATATTGTTGA AATTTTAACA 
GAAAAAGGCA TTTTATCAGA AGTTTTTAAC AAAGTTTCAA AAAGAGTTGT TGAAAGACTT 
TCTTTACGAT GGGAAGGAAT TAATTTCTCA TGTATTGTAA TAGATATGAA GGGAAATATA 
CTTGGAAAAT CTGATTAA 

 

Protein sequence

MSKIDFRLEK TFGYTTGACA AAGAYSALYF LKNNEKLNFV EILNLKGDSL IIPIKNIEKR 
GNTAVSTVEK FAGEDIDITN GMDIKIEVIL ENWDDGYPKP SNVIIIGGTG VGLITKSGLQ 
IKPGDHAINP KPREMIETNL KSLLKDDEYV TVKISVPTGD EIAKKTLNPK LGIVGGISIL 
GTTGIVRPMS NEAYKESLAP QIDVALANNF ENLIFVPGNI GTKHAKILLN AEEDQIIEVS 
NFWDYMLDKA KEKGVKDIMV FGHAGKIVKL AGGIFDTHSR VADARNEILC AYASLVSQDV 
EMLQKILQSN TTEDIVEILT EKGILSEVFN KVSKRVVERL SLRWEGINFS CIVIDMKGNI 
LGKSD