Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1144 |
Symbol | |
ID | 5738256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 1073029 |
End bp | 1073718 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 641283637 |
Product | ribonuclease III |
Protein accession | YP_001549189 |
Protein GI | 159905527 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT TTGAAAAACT GCTTTCGAAA CTCGATATAA AATTTAATGA TTTAAATATA TTTAAACGAG CATTTATGCA TTCTTCGTAT GTAAATGAAC AGAAAAATAC TAATTTGGAA GACAATGAAA GACTTGAATA TTTAGGAGAT GCTGTTTTAG AGTTAATAAT TAGTGAATAC TTGTTTAAAC AGGAAAATTT ATCCGAAGGG GAAATGTCAA AATTGCGGGC GAAATATGTC TGCGAAAGTG CACTTTTTAC ATATGCTAAA AAACTTAAAT TCGATAATTA CGTCCTTTTA GGAAAGGGGG AATTAATATC TAAAGGATAT AACAAACCTG CAATAGTTTC AGACGTTTTT GAGGCATTTA TTGCCGCAAT ATATTTAGAT CAGGGTTTAA ATTCGGCTAA AAAATTTGTA TATAATCACA TACTTCCAAT TATCGAAGAA AGTTCTAAGG AATTGTTTAT CGATTATAAA ACCAAATTAC AGGAATTTCC AGAATTAATC AATAAATCAA TAAATTATGT AAATTTAGAA GAAGCTGGAG AACCTCACGA TAAAAAATTT GTTGTTGCGG TAAAACAGGA TCGAAAAATA CTTGGAAAGG GAATTGGAAA AAGTAAAAAG GAAGCTGAAA TGAAAGCTGC TAAAAATGCG CTTTTAAAGC TTGAAAAGAA TAAAAATTAA
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Protein sequence | MKNFEKLLSK LDIKFNDLNI FKRAFMHSSY VNEQKNTNLE DNERLEYLGD AVLELIISEY LFKQENLSEG EMSKLRAKYV CESALFTYAK KLKFDNYVLL GKGELISKGY NKPAIVSDVF EAFIAAIYLD QGLNSAKKFV YNHILPIIEE SSKELFIDYK TKLQEFPELI NKSINYVNLE EAGEPHDKKF VVAVKQDRKI LGKGIGKSKK EAEMKAAKNA LLKLEKNKN
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