Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_1119 |
Symbol | |
ID | 5737875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 1052893 |
End bp | 1054245 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641283612 |
Product | signal recognition particle protein Srp54 |
Protein accession | YP_001549165 |
Protein GI | 159905503 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.227466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTTGATA AATTAGGCCA GAATCTCTCT GAAGCACTAA ACAAAATTAA GAACGCTACT TTTGTCGATA AAAAACTCGT AAAAGAAGTA ATTAAAGATA TCCAGAAAGC TTTAATCCAG TCCGACGTTA ATGTAAAGCT CGTATTTAAC ATGAGCAAGG AAATTGAGAG AAAAGCTATC GAAGAAGCAC CTCCAAAGGG ACTCTCAAAA AAAGAACACA TTGTAAAAAT TGTTTACGAT GAACTCGTTA AATTGCTTGG AGAAACCATT CAAAAGTTAG AACTCGATGC TTCGAAAAAA TCTGTAATTT TACTTATTGG TATTCAGGGA AGCGGTAAAA CAACGAGTGC TGCAAAACTT GCAAGATATA TCCAGAAAAA AGGTTTAAGA CCGGGATTAA TTGCAGCGGA TGTTTACAGA CCTGCAGCAT ACCAGCAGTT AAAACAGCTA TCTGAAAAAA TAAACGTTCC ACTATTTGGT GATGAAACAA GAACAAAAAC GCCTGTAGAT ATTACTAAAG AAGGAATGGA AAAACTAAAA AAAGTAGATG TTATAATCAT CGATACAGCA GGTAGGCACA AGGAAGAAGA AGGTCTTTTA GCTGAAATGA AAGAAATGAA AGATTTAACT AATCCAAATG AAATAATCCT TGTAATTGAT GGAACTTTAG GTCAGCAGGC TAAAAATCAA GCAAAAGCAT TCAAAGATTC AGTTTCAGAA ATTGGGAGTA TTCTGGTTAC AAAATTAGAT GGTTCTGCAA AAGGTGGTGG TGCTTTAAGT GCTGTTGCAG AAATCAATGC CCCAATTAAA TTTATCGGAA CTGGTGAAGG AGTCGACAAT TTAGAACAGT TCGACCCAAA AAAATTTATA TCGAGAATTC TCGGATTTGG GGATTTAGAT TCCCTTTTAG AAAAGACTGA AGATATAATG GACGAATCAG CGGAAGAAAG TATTGATTCT ATTTTAAAGG GTAAATTTAC ATTGATCGAG CTTTACGCAC AGCTTGAAAC AATATCAAAA ATGGGTCCAA TGAAGCAGAT TTTAAGTATG ATTCCTGGAA TGGGCGGAAA CATGCCGAAA GAAGCTGCGC AGTTAACCGA GGATAAATTA AAAAGATACA AAATCATGAT GGACTCAATG ACGATGGAAG AAAAAGAAAA TCCCGAACTT ATAAAAACTT CAAGACTTCA GAGGATTGCA AGGGGTGCTG GAGTAAAACC GGAAGAGATA AAGGACCTTT TAAAATATTA TTCAACGACC AAAAATGCGT TTGGAAATTT GAAGCGCGGA AAAATGCCAA AAATGGGCGG ACAGATGGGC CAGATAATGA GGCAGTTGAT GTATAAAGAT TAA
|
Protein sequence | MLDKLGQNLS EALNKIKNAT FVDKKLVKEV IKDIQKALIQ SDVNVKLVFN MSKEIERKAI EEAPPKGLSK KEHIVKIVYD ELVKLLGETI QKLELDASKK SVILLIGIQG SGKTTSAAKL ARYIQKKGLR PGLIAADVYR PAAYQQLKQL SEKINVPLFG DETRTKTPVD ITKEGMEKLK KVDVIIIDTA GRHKEEEGLL AEMKEMKDLT NPNEIILVID GTLGQQAKNQ AKAFKDSVSE IGSILVTKLD GSAKGGGALS AVAEINAPIK FIGTGEGVDN LEQFDPKKFI SRILGFGDLD SLLEKTEDIM DESAEESIDS ILKGKFTLIE LYAQLETISK MGPMKQILSM IPGMGGNMPK EAAQLTEDKL KRYKIMMDSM TMEEKENPEL IKTSRLQRIA RGAGVKPEEI KDLLKYYSTT KNAFGNLKRG KMPKMGGQMG QIMRQLMYKD
|
| |