Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0702 |
Symbol | |
ID | 5739064 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 647608 |
End bp | 648387 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 641283168 |
Product | proteasome subunit alpha |
Protein accession | YP_001548751 |
Protein GI | 159905089 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | [TIGR03633] proteasome endopeptidase complex, archaeal, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.959653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACAAA TGGTTCCGGC ATCAGGATAT GATAGGGCAA TAACCATATT CAGCCCAGAA GGAAGACTTT ACCAGGTTGA ATATGCTAGA GAAGCAGTGA GACGAGGAAC CACTGCAGTT GGCATTAAAT GTAATGATGG GGTAGTTCTC GCAGTTGACA GAAGAATCAC AAGTAAATTA ATCGATGTTT CTTCAATTGA AAAAATATTC CAGATTGACG ACCATATTGT AGCTGCTACA TCAGGATTAG TTGCTGATGC AAGAGTTTTG ATCGATAGAG CAAGACTCGA AGCGCAGATG AACAGGATTT CATACGGTGA AGCAATTACA GTTGAAGCGC TTGCAAAAAA AATCTGCGAC ATTAAACAGG CATACACCCA GCACGGTGGC GCGAGACCAT TTGGTTTAGC ACTTTTAATT ACCGGAATCG ACAGACACAG TGCAAGGTTG TTTGAAACTG ACCCAAGCGG TGCTTTAATA GAATACAAAG CAACAGCAAT CGGTTCAGGA AGGCCTATTG CAATGGAAGT TCTCGAATCA AAATACGACG AAAATATGAT TGTTAGCGAA GGAATGGAAT TAGCACTTTA CGCTTTAAGC AAAACTACTG AAGAATTAAA GCCTGAAAAT ATAGATATGG CAATTGTAAA GGATTCTGGA AAATTAGTTG AAAAAATAAG TGTTGATGAA ATTGAAAAAA TTGTAAAGGC AGTTTACAAA AAAGTTGAAG CTGAAGAAGC GGAAGCTGAA AAAAATAAAG TCGAAGAAGA TATTGAATAA
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Protein sequence | MQQMVPASGY DRAITIFSPE GRLYQVEYAR EAVRRGTTAV GIKCNDGVVL AVDRRITSKL IDVSSIEKIF QIDDHIVAAT SGLVADARVL IDRARLEAQM NRISYGEAIT VEALAKKICD IKQAYTQHGG ARPFGLALLI TGIDRHSARL FETDPSGALI EYKATAIGSG RPIAMEVLES KYDENMIVSE GMELALYALS KTTEELKPEN IDMAIVKDSG KLVEKISVDE IEKIVKAVYK KVEAEEAEAE KNKVEEDIE
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