Gene MmarC6_0693 details

Gene Information

• Locus tag: MmarC6_0693
• Symbol: rpl1P
• ID: 5739046
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 639013
• End bp: 639654
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 641283159
• Product: 50S ribosomal protein L1P
• Protein accession: YP_001548742
• Protein GI: 159905080
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0081] Ribosomal protein L1

Plasmid Coverage information

• Num covering plasmid clones: 37
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACAGTG ACAAAATACT GAATGCAGTG AAGGAGGCTC GAACTCTTGC TAAGCCGCGG 
AACTTCACGC AATCCGTTGA TCTCATCGTC AACTTGAAAG AGTTGGATCT TACAAGACCT 
GAAAACAGGT TGAAAGAACA GATCGTTTTA CCAAGTGGAA GAGGTAAAGA CGTTGCGATT 
GCGGTTATTG CGAAAGGTGA CTTGGCTGCT CAAGCAGAAG ACATGGGCCT CACTGTAATA 
AGACAGGAAG AATTAGAAGA ATTAGGTAAA AACAAAAAAA CAGCTAAAAA AATTGCTAAC 
GCACACGGCT TCTTTATCGC TCAAGCTGAT ATGATGCCAT TGGTGGGTAA ATCATTAGGT 
CCTGTTTTAG GTCCTAGAGG TAAAATGCCA CAACCAGTGC CTGCAAATGC AAATTTAGCG 
CCTTTAGTTG CTAGATTCCA AAAAACTGTT GCAATCAACA CAAGGGATAA ATCATTATTC 
CAAGTGTACA TTGGACATGA ATCAATGAGC GATGAAGAGC TTGCTGCAAA TGCTGAAGCA 
ATTTTAAACG TAGTGTCCAA AAAATACGAA AAAGGGCTCT ACCACGTTAA AAGTGCATTT 
ACAAAACTTA CAATGGGCGC AGCTGCTCCT ATAGAAAAGT AG 

 

Protein sequence

MDSDKILNAV KEARTLAKPR NFTQSVDLIV NLKELDLTRP ENRLKEQIVL PSGRGKDVAI 
AVIAKGDLAA QAEDMGLTVI RQEELEELGK NKKTAKKIAN AHGFFIAQAD MMPLVGKSLG 
PVLGPRGKMP QPVPANANLA PLVARFQKTV AINTRDKSLF QVYIGHESMS DEELAANAEA 
ILNVVSKKYE KGLYHVKSAF TKLTMGAAAP IEK