Gene MmarC6_0307 details

Gene Information

• Locus tag: MmarC6_0307
• ID: 5739003
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: +
• Start bp: 278912
• End bp: 279610
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 641282771
• Product: HhH-GPD family protein
• Protein accession: YP_001548360
• Protein GI: 159904698
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2231] Uncharacterized protein related to Endonuclease III

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGACTATA AAGAGATATT TCAAAAAATT TACGACCATT TACTTGAATT ATACGGCCCA 
CAGGGCTGGT GGCCACTTTT AGACGTCGAT GGATGCAACC CTACAAAAAC TGGCTCAGTA 
AATGGATATC ATCCCAATAA TTACGAATAT CCAAAAACAA AAAATCAGTG CTTTGAAATC 
TGTATCGGTG CAATTTTAAC CCAAAATACT TCTTGGCCGT CTGTTGAAAA ATCATTAAAA 
AATTTAAGAA ATTTAATAGA AATAACTCCT GAAAATATAA TTAATTTAGA TATTGAACTT 
TTAAAAGAAG CTATTAAACC AAGCGGATAT TACAATCAAA AATCGGAACG TTTGAAAGGT 
TTTTCAAAGT ATTTTATTGA ATTAACAGAT ACCCCGTCAA GAGAAGAACT GCTAAAATTA 
AAAGGAGTTG GCCCGGAAAC TGCCGATTCG ATGCTTTTGT ATGCATTTAA AGTTCCAAGT 
TTTGTAGTTG ATGCATACAC CAAAAGAATG CTTTTTAATT TAAATTTAAT TGAAAATAAC 
GAAAAATACG ATAAAATTAA AGAATTATTC GAAGAAAATA TTCCAAAAAA CCTTGAAATA 
TATCAAGAAT ACCATGCAAT TTTGGTCGAA CATGCTAAAA ACTACTATCG AAAAAAAGAA 
AATTACTGTA AATGTCCACT TCTAAAAATA ATAAAATAA 

 

Protein sequence

MDYKEIFQKI YDHLLELYGP QGWWPLLDVD GCNPTKTGSV NGYHPNNYEY PKTKNQCFEI 
CIGAILTQNT SWPSVEKSLK NLRNLIEITP ENIINLDIEL LKEAIKPSGY YNQKSERLKG 
FSKYFIELTD TPSREELLKL KGVGPETADS MLLYAFKVPS FVVDAYTKRM LFNLNLIENN 
EKYDKIKELF EENIPKNLEI YQEYHAILVE HAKNYYRKKE NYCKCPLLKI IK