| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0207 |
|---|
| Symbol | upp |
|---|
| ID | 5737847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 189674 |
|---|
| End bp | 190369 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 641282672 |
|---|
| Product | uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_001548261 |
|---|
| Protein GI | 159904599 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0035] Uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 0.793413 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAG ATGAAAGATG GGAAGGAGTT TACTCTTTTG AAGACTCGCC CTATTTAATG
GAAACATTGA CTGATTTAAG AAAGATTGGT ACTGAAAACA TATCTTTTAG AAAAGGACTC
GTCAGACTTG GAAGATACAT GGGTTACGAA TTGACTAAAA CCATGGAATT TGAAAAAATG
CCCATTCAAA CACCTTTAGA AAAAACTCAA GGCGTTTTTG CAAAAGATAG GAAAAATGTA
GTGATTATCA CAATTTTAAG AGCTGCATTT CCACTTATGG AAGGATTAAT TAAAAATTTC
GAGTCTGCAA AGGTAGGAAT CGTTTCTGCA TCAAGAGGAC ATGCGCCAGA CTTTAACATA
GAGATGAATT ACATAAAAGT TCCACAGCTT AACCCTGAAG ATACAGTTAT TGTATCTGAC
CCGATGATTG CAACAGGTTC TACATTAATA CATGTTTTAA GAGAGTTTAA AGACTCAAAA
CCAAAACGAA TGATGATAGT TGGAGTTCTT GCAGCCCCTG AAGGGATAAA TGCAGTTAAA
GCAGAATTTC CAGACGTTGA AATATTTGTA ACAAAGATCG ACGAAAAACT AAATAAAGAC
GGATATATAG TTCCGGGCCT TGGAGATGCA GGGGATCGTG CATTTGGCGA ACCATTTAAA
GTATCTATGC TACCGCAGAT GCATAACTTG GAATAA
|
|---|
| Protein sequence | MIKDERWEGV YSFEDSPYLM ETLTDLRKIG TENISFRKGL VRLGRYMGYE LTKTMEFEKM
PIQTPLEKTQ GVFAKDRKNV VIITILRAAF PLMEGLIKNF ESAKVGIVSA SRGHAPDFNI
EMNYIKVPQL NPEDTVIVSD PMIATGSTLI HVLREFKDSK PKRMMIVGVL AAPEGINAVK
AEFPDVEIFV TKIDEKLNKD GYIVPGLGDA GDRAFGEPFK VSMLPQMHNL E
|
|---|
| |