| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1255 |
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| Symbol | |
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| ID | 4929103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 1198233 |
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| End bp | 1199921 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640166748 |
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| Product | S-layer protein |
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| Protein accession | YP_001097767 |
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| Protein GI | 134046282 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01564] S-layer protein, MJ0822 family
[TIGR01567] S-layer-related duplication domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.400694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTATGA GCATGAAAAA AATTGGTGCT ATTGCTGTAG GCGGTGCAAT GGTTGCATCC
GCTTTAGCAA CAGGCGCTTT CGCTGCTGAA AAAGTTGGAG ATGTAGACGC TTTCGCTGCT
GATGTAGTGG TAGATGGTGA AGCAAACGTG GATATTGTAG TAGGTTCAAA CGCTGCTGCT
TTAGACGTTG TTTCAGCTGC TAACATGGCT GCAAAAATCG GATCATTAAT GTTCAAAGAA
GGAACTGTTG AAGACGGTAG TGCAGAAATT ACAGTAAGTG CTGCAGCAGA ATCCGACGAA
GTTAAGGATG TATACACTGA CGCTACTGTA TCACTTGTTA AAAAAGCACT CGTAATTACT
GCTGCTGATG ACGATTACAC AAGTGCTGTA ACAGGTATTT TAGCATTAGC TGATGGTACT
GGTGTTGCAA CAGAATTATT TGGAATTACA ACTGCAGGTG CTGCAGCTGA TTTAGAAGAC
TTACAAACCT TAGCATTTGT ATCCGATGCT GACCCTTCAG GATGGGATTT CAATTCGGCA
AGTGCAGATT TCGAAGCTGC AGAAGTACTC GTAGCTACAA TTAATTCAGA TTTAGCTACA
CTCGGTACTG CTGGTGCAGA TATAGAAATT TTAGAAGACG AAGTAATCTA CGCATCATTA
GCATTCGAAG AAGACAAATA CGGTGCTTTA GGAACTGACT ACGCTGCATT ATTCCCGGGT
ATGAGAATTC CATTACTCGG TGAAGAAAAA GTAATTGTTA AACTCGACAC AGATGATGAT
TTAGTTCTTG TGGGTGACGA AGCATACGAT GGAGTTATCA AACAAGGTGA ATCATACGAC
CTTGGAAACG GATACACCGT AGAAGTAAAC AACGTTTTAA TGTCCGGTAC AAACTACAAA
GTAGATGTTT CAATCTTAAA AGATGGAAAA GTTGTAGCTT CAAAATTCGA CACAGTAAAA
AAACAGGCAA CACAGCTTAA ATTGGTTTAC AAAGACGTAG GTGTAGTTGT AAACGATGCA
TGGACTGATG TTGGTGAAAA CTACGGTTTC GCAGAACTTG TGATCGCAGA CAATGTGGTT
GAAATGGAAC TTGGGGAAGA ATTCATCCCT GACTACGAAG CATACACAGT TGACTACATA
GCAGGTACCG GTCTTACATT ATCAGACAAA GCTACCGCAA CAGGAACAAT TGTTGGTGTT
GCTTTAAAAT ACGTTGGAGA AGACGTTGAT AAAATTTCAA AAGACAAAAC ATTCACAATT
GCAGACTACG CAAAATTAGA CCTTGATGAA GACAGCGGTA AAATGGCTGC TAAATTCTTA
ATGGACGAAT CAAAAGATGT AACCGTAAAC ATCGGTGAAA AAGTTTCAGT ATTAAACGCT
GAAATTAAAT TAGATGACAT TGCTGCTGAA GCTAAAGAAG CTGTTGTGAT GACTGCACCA
ATCGCAGTAT TAGACTCAGA AGCTTCATTA GATGATGCTG ACAAAGCATT AATCTTAGTT
GGTGGACCAG TTGTAAACGC ATTAACCGCT GAACTCGCTG ATGCTGGATT AATCGCAATC
GACAACGAAT CACCTGCAAC CTTAGCAGTA GCTGCTGGCG CTGCAAACGG TAACGATGTA
TTGGTTGTAG CTGGTGGAGA CAGAGCTGCA ACACAAGATG CTGCTGATGC ATTAATCGCT
ATGTTATAA
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| Protein sequence | MAMSMKKIGA IAVGGAMVAS ALATGAFAAE KVGDVDAFAA DVVVDGEANV DIVVGSNAAA
LDVVSAANMA AKIGSLMFKE GTVEDGSAEI TVSAAAESDE VKDVYTDATV SLVKKALVIT
AADDDYTSAV TGILALADGT GVATELFGIT TAGAAADLED LQTLAFVSDA DPSGWDFNSA
SADFEAAEVL VATINSDLAT LGTAGADIEI LEDEVIYASL AFEEDKYGAL GTDYAALFPG
MRIPLLGEEK VIVKLDTDDD LVLVGDEAYD GVIKQGESYD LGNGYTVEVN NVLMSGTNYK
VDVSILKDGK VVASKFDTVK KQATQLKLVY KDVGVVVNDA WTDVGENYGF AELVIADNVV
EMELGEEFIP DYEAYTVDYI AGTGLTLSDK ATATGTIVGV ALKYVGEDVD KISKDKTFTI
ADYAKLDLDE DSGKMAAKFL MDESKDVTVN IGEKVSVLNA EIKLDDIAAE AKEAVVMTAP
IAVLDSEASL DDADKALILV GGPVVNALTA ELADAGLIAI DNESPATLAV AAGAANGNDV
LVVAGGDRAA TQDAADALIA ML
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