Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0884 |
Symbol | |
ID | 4928369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 865648 |
End bp | 866586 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640166383 |
Product | hypothetical protein |
Protein accession | YP_001097406 |
Protein GI | 134045920 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2247] Putative cell wall-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.172772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACATTT TTAAGAAATT AGCACTATTA ATGATCGTAT TAATGCCAGT TTCATTTGCA AGCGACGTTA TATTGGTTAG CGACAATTTT GCAGATAAAC TTGTAGCTCA AACTATTGCC GATGAACTCG ATGGATTCGT ACTTATTGAG TCACCATGGG GAAATTTCAG CAATGATACA TTAAATGAAA TATTAAATCA AACTCCCAAA AATGTAGTAA TAATTGGTGG GCTGGTAGCA GTTCCTGAAA ATTATACCGA TGCACTAGAA AATGAAAATA TTACTGTTGA AAGAATCAAC GGTTCCGATA GATATGAAAC AAACAACTTA ACAATAAACC GGTTTAAAGA CCTATTTGTT AACAAAACAA TTTTAATCGT TTATACTGAA GGCGAAAACG ACACATATGG AAATATCACA AACGTAACCT TCGTATTAAC CGATGGTGAA AACATATCAG TTAGTGAAGA AGATATGCAA AAAATGTCTG ACAACATTAC TGTTTTAGAA GATGCTGCAT ACAACTACAG CGGACTTTTA AAAAGACTTC AAAACCATGG ATTCCAAGTA AGTACTGCTT CGATGCCTGG AAATGTTTTA AAAGCAAAAA TCGAAAGAAG AATGAATACT ATTCAGACGA CGCTTCAAGC GTTAGAACAG AATGGAATCA ATATCTCAGA AATTGATACA AAATATGGTG CATTGAATGA AGCATACAAT GGCGGAAATT ACAATTATGC ATACGCTCTT GCAATCCAAT TGGAAGACGA TTTAAAAGCT AAACAGTACA AAACTACAGG CAATACAAAA ATCGAAAAAA CCGTTAAAGT GAAAACAAAT AACGTTAAAC CTTCGAATGA TGATTCTGAT GACGACGAAG AAGAAATAGA ATATGAAAAT GAAACTGAAG AAGATGATAT CAACGAAACT TCAGAATAA
|
Protein sequence | MDIFKKLALL MIVLMPVSFA SDVILVSDNF ADKLVAQTIA DELDGFVLIE SPWGNFSNDT LNEILNQTPK NVVIIGGLVA VPENYTDALE NENITVERIN GSDRYETNNL TINRFKDLFV NKTILIVYTE GENDTYGNIT NVTFVLTDGE NISVSEEDMQ KMSDNITVLE DAAYNYSGLL KRLQNHGFQV STASMPGNVL KAKIERRMNT IQTTLQALEQ NGINISEIDT KYGALNEAYN GGNYNYAYAL AIQLEDDLKA KQYKTTGNTK IEKTVKVKTN NVKPSNDDSD DDEEEIEYEN ETEEDDINET SE
|
| |