Gene MmarC5_0407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0407 
Symbol 
ID4928083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp371559 
End bp372341 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content34% 
IMG OID640165911 
ProductABC transporter related 
Protein accessionYP_001096937 
Protein GI134045451 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.430136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAGTC TTGGTGAAAA CATGATTGTT TCAGTAGATG GAGTTGAATT CAAATACAAA 
AGTACTGAAA TACTAAAAGA CGTTAAATTC GAAGTAAAAA AAGGAGAAGT CGTTTCAATC
CTCGGAATAA ACGGGGCTGG AAAGTCAACC CTTATAAAAT GCATAAATAA GATTTTACCA
CCTAAAAAAG GAACCATAAC TATTGAAAAC TTAGACGTAA ATAAAATGGA TAGGCTTGAC
TTGGCAAAAA AAGTAGGTTA CGTTCCACAG AGGTCTAATG GAAACTACAT GACTGTATTT
GATGCATTGC TTTTGGGAAG AAAACCCCAT ATTAAATGGG AAATCTCACA AAAAGACATT
GAAATTACAG AAAACGTGCT TAAACTTCTC GACCTTGATA AATATGCACT TAGAAACACG
AATGAACTTA GCGGCGGGGA ACTTCAAAAG GTAATTATTG GAAGGGTGCT CGTTCAAGAG
CCAAAATTAA TACTCCTTGA TGAACCTACA AACAATCTTG ACCTGAAAAA CCAGCTTGAA
GTTATGAGAA TACTAAAAGA TGTATCAGTT TCAGAAAATA TTACTTCAAT AATTGTAATG
CACGATATAA ACCTTGCATT GAGGTATTCA GATAAATTCT TGATGTTAAA AGATGGAAAA
ATCTTTGCTG AAGGCGGAAA AGAAATAATC AATACACAAA ACATTGTGGA AGTATACGGT
GTAAACACCC AAATACATGA CTTAAACGGT CAGTTAACTG TAGTTCCCGG AGAAGGTTAT
TAA
 
Protein sequence
MISLGENMIV SVDGVEFKYK STEILKDVKF EVKKGEVVSI LGINGAGKST LIKCINKILP 
PKKGTITIEN LDVNKMDRLD LAKKVGYVPQ RSNGNYMTVF DALLLGRKPH IKWEISQKDI
EITENVLKLL DLDKYALRNT NELSGGELQK VIIGRVLVQE PKLILLDEPT NNLDLKNQLE
VMRILKDVSV SENITSIIVM HDINLALRYS DKFLMLKDGK IFAEGGKEII NTQNIVEVYG
VNTQIHDLNG QLTVVPGEGY