Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0387 |
Symbol | cbiD |
ID | 4928999 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | + |
Start bp | 348752 |
End bp | 349849 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640165892 |
Product | cobalt-precorrin-6A synthase |
Protein accession | YP_001096918 |
Protein GI | 134045432 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1903] Cobalamin biosynthesis protein CbiD |
TIGRFAM ID | [TIGR00312] cobalamin biosynthesis protein CbiD |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.816983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAGA TTGATTTTAG ACTTGAAAAA ACTTTTGGAT ACACTACAGG TGCATGTGCG GCGGCTGGAT CATATTCTGC GCTCTATTTT TTAAAAAATA ATAAAAAATT AGATTTTGTT GAAATTTTAA ATTTAAAGGG CGATTCTTTA ATTATTCCTA TTAAAAATAT CGAAAAACAA GGAAACACTG CAATTTCAAC AGTTGAGAAA TTTTCAGGAG AAGATATTGA TATTACAAAT GGAATGGATA TCAAAATAAA AGTTACTCTT GAAAATATGG ATAATAATTG CTCAAAATCT AGCAACGTTA AAATTATCGG TGGAACTGGG GTTGGATTTA TTACAAAGTC CGGTTTACAG GTAAAACCTG GAAAACCTGC AATAAACCCG AAACCAAGAG AAATGATCGA AACTAATTTA AAATCACTTT TAAAAGATAA TGAATGTGTA ACTGTAAAAA TTTCAGTTCC AAATGGGGAT GAAATTGCTA AAAAGACATT AAATCCAAAA CTTGGGATAA TTGGTGGAAT TTCAATTCTT GGAACTACGG GAATTGTTCG TCCGATGTCA AATGACGCTT ACAAAGAGTC CCTTGCACCC CAAATTGATG TAGCTTTGGC GAATAATTTT AAAAACTTGA TATTTGTTCC TGGAAATATC GGAACAAAAC ATGCTAAAAT TTTATTGAAT GCAGAAGAAG ACCAGATTAT CGAAGTTTCA AACTTTTGGG ACCACATGCT TGATAAAGCG AAAGAGAAAG GAGTTAAAGA TATAACTGTT TTTGGACACG CTGGAAAAAT TGTAAAGCTT GCAGGAGGAA TTTTTGACAC CCATTCAAGG GTTGCGGATG CAAGAAACGA AATACTCTGC GCATATACAT CGTTAGCAAC ACAAGATGTA AAAATACTTC AAAAAATACT TCAATCGAAC ACAACTGAAG ATATAGTTGA AATATTAATT GAAAAAGGTA TTTTAACAGA AGTTTTTGAA AAAGTTTCAA AAAGAGTCGT CGAAAGGCTT TCTTTGAGGT GGGAAGGAAT TAATTTTTCA TGTATCATAA TAGATATGGA AGGGAATATA CTTGGAAAAT ATGTGTAA
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Protein sequence | MNKIDFRLEK TFGYTTGACA AAGSYSALYF LKNNKKLDFV EILNLKGDSL IIPIKNIEKQ GNTAISTVEK FSGEDIDITN GMDIKIKVTL ENMDNNCSKS SNVKIIGGTG VGFITKSGLQ VKPGKPAINP KPREMIETNL KSLLKDNECV TVKISVPNGD EIAKKTLNPK LGIIGGISIL GTTGIVRPMS NDAYKESLAP QIDVALANNF KNLIFVPGNI GTKHAKILLN AEEDQIIEVS NFWDHMLDKA KEKGVKDITV FGHAGKIVKL AGGIFDTHSR VADARNEILC AYTSLATQDV KILQKILQSN TTEDIVEILI EKGILTEVFE KVSKRVVERL SLRWEGINFS CIIIDMEGNI LGKYV
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