Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0197 |
Symbol | |
ID | 4928066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 166005 |
End bp | 167273 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640165696 |
Product | beta-lactamase domain-containing protein |
Protein accession | YP_001096728 |
Protein GI | 134045242 |
COG category | [R] General function prediction only |
COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.904798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATTG CTAAATTTCA CGGTGGCTGC CACCAAATCG GAAAATCTTG CGTAGAAATA AACACTAAAA AATCAAAAGT ATTAATTGAT TGTGGAATGG ACCCTTCAGA CAACGGGCTT CCAGACATTA ACGACTCAGA CGTTGACGCA GTTTTGGTTT CACACGCTCA CTTAGACCAC TGCGGTGCAA TACCTTATTT TAACTTTAAA AAAATATACT GTAACCCCCC AACTGCGGAT TTAATGTACA ATGTATGGAA AGATACAGTA AGCCTTTCAA AAACGTACAG GGAAGAAGAT ATTAAAAAAT CAATGGACGT AATCAAAACT GTAAACTACA GAGAAGAAAA ACAAGTTACT TCAGACATTA AAATGAAAAT GTACGATGCA GGACACATTT TAGGAAGTTC TTCTCTTTAT TTGGATATCG ATGGAAAAAA ATTACTCTAT ACTGGAGATA TCAACGAAAT TGAAACAAGA ACTCTTCGTG CAGCAGATAC TGACTTTGAT AATATTGATA CAATAATTAT TGAATCTACT TACGGATCCC CACTTGATAT AAAACCTGCG AGAAAAGTTT TAGAAAAACA GCTTATCGAT GAAATCTCTG AAACTATCGA CAACGGTGGA AAAGTAATTA TTCCAGTTTT TGCAGTTGGA AGATCTCAAG AAATCATTGT TGTAATTAAC AACTACATGA AAAGCGGTGC TTTAAAAGAA GTTCCAATCT ACATTAATGG ATCTTTAACA CACACTACTG GAATGTACAT GGGATATTCA GACTGGTTAA ATCCAAAAAT AAAAAATGCA ATTGAAAACA GGATCAATCC ATTTGGAAAC CTCATAAAAG GTGGAGATGA AGTTTTCAGT AGAGAACCAT GTATTATTAT TTCAACATCT GGAATGGTTC AAGGAGGCCC AGTACTTCAA TACCTTTCAC TGTTAAAAAA TCCAAGAAAC AAGATTATTT TGACAGGATA TCAAGCTGAA GGAACAATTG GAAGAAGCCT TGAAGAAGGT GCTACAGAAG TAAAACCATT TAAAAGAGCA ATTCCTGTAA ATGGAAAAGT TGTAAAAATC GAGTTTTCTG CTCACGCAGA TTACAATTCG TTACTTCGGT TTATGAAAAA GATACCTCAA CCAAGTAAAG CGATTGTAAT GCACGGGGAA AGATACCAAG CACTCTCTCT TGCAATGACA ATCTGGAAAA CCCTAAAAAT TCCTGCACTT GCACCATCTA TCGGTAGTGT TTTACCTTTA TTTGATTAA
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Protein sequence | MTIAKFHGGC HQIGKSCVEI NTKKSKVLID CGMDPSDNGL PDINDSDVDA VLVSHAHLDH CGAIPYFNFK KIYCNPPTAD LMYNVWKDTV SLSKTYREED IKKSMDVIKT VNYREEKQVT SDIKMKMYDA GHILGSSSLY LDIDGKKLLY TGDINEIETR TLRAADTDFD NIDTIIIEST YGSPLDIKPA RKVLEKQLID EISETIDNGG KVIIPVFAVG RSQEIIVVIN NYMKSGALKE VPIYINGSLT HTTGMYMGYS DWLNPKIKNA IENRINPFGN LIKGGDEVFS REPCIIISTS GMVQGGPVLQ YLSLLKNPRN KIILTGYQAE GTIGRSLEEG ATEVKPFKRA IPVNGKVVKI EFSAHADYNS LLRFMKKIPQ PSKAIVMHGE RYQALSLAMT IWKTLKIPAL APSIGSVLPL FD
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