| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0183 |
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| Symbol | |
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| ID | 4928525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 152443 |
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| End bp | 154692 |
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| Gene Length | 2250 bp |
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| Protein Length | 749 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640165683 |
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| Product | Hef nuclease |
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| Protein accession | YP_001096715 |
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| Protein GI | 134045229 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1111] ERCC4-like helicases
[COG1948] ERCC4-type nuclease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.818144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGTAA ATCATCCTTT GATAAAACCA GAATCTATTG AAGCTAGAAT TTACCAGCAA
CTCGTTGTGG CAAGTGCACT AAAGCAAAAT ACGCTTTGTG TTCTTGGAAC TGGACTTGGT
AAAACTGCAA TTGCAGCTCT TACAATAGCA GGGATTTTAT CAAAACAGGA CGGAAAAGTT
TTGATTATCG CACCATCAAG GCCATTGGTT GACCAGCACT TTAAGAGCAT GAATCAATTT
TTAAATATCG ATTCAGAAAA AATTGTTATT TTAAACGGCA AAATCTCGCC GAAAAAACGA
GAAACAATGT GGGAATCCGG TAAAATCTTT ATAGCAACTC CCCAAGTTGC AGAAAACGAT
ATCATTTCTA AAATTTTAAA ACCATCTCAA TTTTCACTTT TAATTGCGGA TGAGGCACAC
CATACAACCG GAAATCACTC TTACACGTTT GTTGCAAATA AATTTAAGAA AAAATCACAC
GTTTTAGGAT TAACTGCATC TCCCGGTTCA AATATTGAAA GAATAATTGA AATTTGCGGG
AATTTAGGAA TTGAACACGT TGAAATAAAA ACTGAGGAAG ATCCGGATGT TTCACCATAT
GTTGCAAAGG TAAAAATGCG ACCAAGGCGT GTCGAACTTC CAGAAGAGTT TGGAGTAAAT
TTAACTCTTT TAAAAAATGC ATTAAAGGAT CGTTTAAGAG ATTTAAAAGA AAATCGAGTA
ATTCATACTA TAAATGTAAA TAAATCCGAG TTACTTGGTT TAAATAAAAG AATAATGTCA
ATGGATGACA ATATAAAGTA TGAAATGCTT CGAATTTCAT CTGAAGCTGT AAAATTAGAG
CACGCAATTG AAATGCTCGA AACGCAAGGC AGGAGCACTT TTTTAAATTA CTATCAAAAG
CTTTTAACCC AAAATACAAA ATCTGCAAAA GAAATTACAA ACGATCCAAG ATTTATTCAG
GTAGTTAAAA ATTTAAATGA ACTAGACATC GAGCACCCAA AATACGAAAA AATGCTCGAA
ATTGTAAGTG AAATTTTAAA AGAAAACGAA AAAATAATTA TCTTTGCACA ATATCGGGAT
ACTGTTCAAA AAATTGTGGA TTTACTGTCT GAAAACGAAA TTGAAGCAAT AATGTTTGTT
GGGCAATCCA ATAAAGATGG AAAAGGAATG AGCCAGAAAG AACAGGCAAA AGCAATTGAA
AAGTTTAAAA ATGAGGCAAA CGTGCTTGTT TCAACGAGTG TTTCAGAAGA GGGAATCGAT
ATTTCAAGTG TAAATTACGT TTTATTTTAC GAACCCGTTC CTTCAGAAAT TAGAATGATT
CAAAGAAGGG GGCGTGCTGC AAGGGGCGAA GGTGGGCAGG TAATCGTTTT GATTGCGGAA
AAAACACGAG ATGAAGGGTA CTATCGAGCA GGACTCGCAA AAGAAAAGAA CATGAAAAAT
ATCTTAAAAA ACATGCAGAC ATCGTTAAAT AAAAAATTAA AAGAATTACA TGAAGAAAAA
GTCGAAAAAA CTGAAAATAA AGATCATTAT TTGGATTTGA GATCAGTTGT AAATTCTAAA
ACTTCTGCTA AATCAGAAGA AAAAAAACCG ACAAAACTCG ATAAAAAAAG CAGAAATGGA
CTACCAAACA AAGCAACTAT TATTGTAGAT TCAAGAGAAC GCCATATTGG CAGGTACCTT
TCAGAAAGAG CAGAAGTTGA ATTCAAAACC CTTGAAATTG GAGATTATAT TTTAAGTGAC
AGGGTTGTAG TTGAGAGAAA AACTGCAGAG GACTTTGAAA ATTCAATCAT TGATAAAAGG
CTATTTAATC AGATAATGGA CTTAAAAAAA TATGAAAGAC CTTTAATGAT TATCGAAGGA
AATGAATTTG TGAGAATTCA TGAAAACGCG ATACGAGGTA TGATGTTTTC AATAATGATC
GATTACCAGA TTCCAATAAT GTTTTCAAGG GATATCGAAG ATACTGCAGA TATACTGGTA
AAACTTGCAG AAAGAGAGCA GATAAAAGAA AAACGAGAAA TATCGATAAG ATATGGAAAA
AGGCCGATGT CATTAAAAGA GCGCCAGAAA TTTTTGGTAG AAGGACTTCC TGATGTTGGG
CCGGTGATGG CTGAAAATCT GTTAGATAAT TTTAATTCGG TTGAAAATAT ATTTACTGCA
ACAGAAGAAG AATTAAAGGC TGTTGAGGGA ATGGGCCCTG TAACTGCTAA AAAGATTAAA
GAAGTTGTAA CTAAAAATTA TAGAGAATAG
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| Protein sequence | MHVNHPLIKP ESIEARIYQQ LVVASALKQN TLCVLGTGLG KTAIAALTIA GILSKQDGKV
LIIAPSRPLV DQHFKSMNQF LNIDSEKIVI LNGKISPKKR ETMWESGKIF IATPQVAEND
IISKILKPSQ FSLLIADEAH HTTGNHSYTF VANKFKKKSH VLGLTASPGS NIERIIEICG
NLGIEHVEIK TEEDPDVSPY VAKVKMRPRR VELPEEFGVN LTLLKNALKD RLRDLKENRV
IHTINVNKSE LLGLNKRIMS MDDNIKYEML RISSEAVKLE HAIEMLETQG RSTFLNYYQK
LLTQNTKSAK EITNDPRFIQ VVKNLNELDI EHPKYEKMLE IVSEILKENE KIIIFAQYRD
TVQKIVDLLS ENEIEAIMFV GQSNKDGKGM SQKEQAKAIE KFKNEANVLV STSVSEEGID
ISSVNYVLFY EPVPSEIRMI QRRGRAARGE GGQVIVLIAE KTRDEGYYRA GLAKEKNMKN
ILKNMQTSLN KKLKELHEEK VEKTENKDHY LDLRSVVNSK TSAKSEEKKP TKLDKKSRNG
LPNKATIIVD SRERHIGRYL SERAEVEFKT LEIGDYILSD RVVVERKTAE DFENSIIDKR
LFNQIMDLKK YERPLMIIEG NEFVRIHENA IRGMMFSIMI DYQIPIMFSR DIEDTADILV
KLAEREQIKE KREISIRYGK RPMSLKERQK FLVEGLPDVG PVMAENLLDN FNSVENIFTA
TEEELKAVEG MGPVTAKKIK EVVTKNYRE
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