Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0180 |
Symbol | |
ID | 4927600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 145743 |
End bp | 146990 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640165680 |
Product | diaminopimelate aminotransferase |
Protein accession | YP_001096712 |
Protein GI | 134045226 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00038111 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGTA TTTTGGATGA AACTATTGAA ATATCGTCTG ATTTAATAGC AATAAACTCG GTAAATCCAA CTTTTGGTGG AGTTGGAGAA AAAGAAAAGT CAATTTACAT AAAAAATAAA TTAAAAGAAT ATCATGAAAA GTATTCGATA AAAAACTGTA AAATAAGTGA ATACAATACA ATCGATTCTA ACGGAATAGA AAGGCCAAAT ATCGTTTCAA AATACGACTT TGGAAAAGAT ACATCATTAA CAATAATTTC CCACATGGAT ATCGTCCCTG AGGGTGATTT TGGTCTTTGG AATTCCGATC CGTTCAAAGC TGAAATAAAA GACGGGATAA TTTATGGCAG AGGCAGTGAA GACAATCATA AAGGAATCGT TTCATCTTTT TTACTTTTAA AAATGATTTT TGAAGAAAAA ATCTATCCAA AATACAATTT AAATCTAATT TTTGTGTCAG ATGAAGAGGA TGGTAGTGAA TACGGGCTTT CATATCTTGT AAATAACTTT AAAAATGAAC TTTTTGATTC GAAAGACTTG ATAATCGTTC CAGATTTTGG AATGCCCGAA GGAGAATTTA TAGAAATTGC CGAAAAAAAT ATACTCTGGC TAAATTTTAA AATTAAGGGG AAACAGTGTC ATGGAAGTAC CCCTGAAAAT GGATTTAACG CAGATGTTAT GGCGTTTTCA TTTGGAAAAG GGCTCTATGA TACATTATAT AATAAATACA GTGAACTTGA TTCGATATTC AATCCACCAT TTTCAACGTT TGAACCTACA ATTTTAAGAA ATAATGTTGA AAACACAAAT ACGATTCCAG GATACGTTGA ATTGAACTTT GATTGCAGAA TAATTCCAAA ATACGATCCA AAAGAAGTAT TGGTGGATAT TGAAAACTAC ATTGAAGATT TTAAAAACGA AATTGAAAAA CATGTTGTTC ACTTTGATAT TTCTGAAAAA GAAAATATTT CAATAGAATA TGAAATTTTA AAACTTGAAA AAACGGAAAA AACAAAAACT GATTCAGAAG TTGTGGAAAA ATTAGGATCT GCAATTAAAA ATGTGTTAAA TAAAGAACCT GTTTTATGTG GGATGGGCGG TGGAACCGTT GCTGCATTTT TGAGGGAAAA AAAATACAAT GTTGCAGTTT GGGGGATAGG GTATGAGACT GCACACCAAC CAAACGAACA TATCAAAATA GAACATTTGA TACAAATGGC TGAAATTTAT CTCGATATCT TAAAATAA
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Protein sequence | MKSILDETIE ISSDLIAINS VNPTFGGVGE KEKSIYIKNK LKEYHEKYSI KNCKISEYNT IDSNGIERPN IVSKYDFGKD TSLTIISHMD IVPEGDFGLW NSDPFKAEIK DGIIYGRGSE DNHKGIVSSF LLLKMIFEEK IYPKYNLNLI FVSDEEDGSE YGLSYLVNNF KNELFDSKDL IIVPDFGMPE GEFIEIAEKN ILWLNFKIKG KQCHGSTPEN GFNADVMAFS FGKGLYDTLY NKYSELDSIF NPPFSTFEPT ILRNNVENTN TIPGYVELNF DCRIIPKYDP KEVLVDIENY IEDFKNEIEK HVVHFDISEK ENISIEYEIL KLEKTEKTKT DSEVVEKLGS AIKNVLNKEP VLCGMGGGTV AAFLREKKYN VAVWGIGYET AHQPNEHIKI EHLIQMAEIY LDILK
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