Gene Mmar10_2522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2522 
Symbol 
ID4285784 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2746396 
End bp2747616 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content66% 
IMG OID638142021 
Productlytic murein transglycosylase 
Protein accessionYP_757746 
Protein GI114571066 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTC GACTGCTTCT GCTCGCCGCC AGTTTTTCCC TGATCGCTGC CGATGCTGCA 
GCCCAGCCCG AAGGCGAGTC TTTCGCCGAT TGGCGCGGCG GCTTTCGTGA GCGTTTGATC
GCGTCAGGCG CCGAGGAGGC GACTGCGGCC GCTATGCTGG ACGGGTTGCA GCCGGAAATG
AGGATCATCG AGCGTGATCG CAGCCAGCCG GAATTCGTGC GGCCGCTCTG GTCCTATCTT
GATATTGCGG CATCCGATCT GCGTATCCGC AACGGCCGCG ATGCATTCGC GGGAAATCGG
GATGACGTTG ATGCGGTCGC GGCGCATTTC GGTGTGCGGG CGGAAATCCT GATCGCGATC
TGGGGCCTTG AGAGCTCTTA CGGGGCAATC CCGGGCAATA ACGACATCGT CCAGGCGCTG
GCGACCCTGG CCTGGGAAGG CCGCCGCCGC GACTGGGCCG AGGCGCAATT GATCGCCGTC
GCGGAGATGC TGGAGTCGGG CTATGCGACG CGGCAACAGC TCACCGGTTC CTGGGCCGGA
GCGATGGGCC AGATGCAATT CATCCCGACC ACCTATCTGG AGCGGGCCCA TGACTGGGAT
GGCGACGGGC GCCGTGATAT CTGGACCAAT CCTGCCGACG CGCTTGCCTC TGCTGCCAAC
CTGTTGTCGC GCGCCGGATG GCGTGACGGT GAGCCGGCGA TCCGGGAAGT CCGCGTGCCG
GTCGGCTTCG ACTTTGCCGC CTGGGATCCC GACCAGTCGC GGCTGGTCAG TGACTGGGCC
ATGCGTGGCC TGCGACCGGC GAGTGGCGAA TGGCAGGCAG ACGATCTGAT GCGCGCGGCG
CGGCTGGAGC TTCCGGCCGG TGGCCAGGCG CCGGGCTTTC TCACCTTCCC CAATTTCCGG
GTGATCAAGC GCTATAACAA TTCGACATCC TACGCGATCG GGGTCGCCCA TCTGGCCGAC
CGCATTGCTG GTGACCCGGC CCTGGTCGGT CCCTGGCCGG AAAACAACCC GCCACTGACC
CGCAGCCAGA CCCGCGAGGT CCAGGCGACG CTCAATGCCC TGGGTTTTGA CAGCGGAACC
CCTGACGGGC TTGCAGGCCC GAACACGCGG GCTGCCCTGC GTGATTTCCA GCGGGCGAAT
GGTCATCTGG CCGACGGCTA TCTGGGACGG GCGATGTATG ACGCCGTCCT GGCCAGCCGC
AGCTCGGATC AGGCCGACTG A
 
Protein sequence
MIRRLLLLAA SFSLIAADAA AQPEGESFAD WRGGFRERLI ASGAEEATAA AMLDGLQPEM 
RIIERDRSQP EFVRPLWSYL DIAASDLRIR NGRDAFAGNR DDVDAVAAHF GVRAEILIAI
WGLESSYGAI PGNNDIVQAL ATLAWEGRRR DWAEAQLIAV AEMLESGYAT RQQLTGSWAG
AMGQMQFIPT TYLERAHDWD GDGRRDIWTN PADALASAAN LLSRAGWRDG EPAIREVRVP
VGFDFAAWDP DQSRLVSDWA MRGLRPASGE WQADDLMRAA RLELPAGGQA PGFLTFPNFR
VIKRYNNSTS YAIGVAHLAD RIAGDPALVG PWPENNPPLT RSQTREVQAT LNALGFDSGT
PDGLAGPNTR AALRDFQRAN GHLADGYLGR AMYDAVLASR SSDQAD