Gene Mmar10_2320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2320 
Symbol 
ID4285340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2532218 
End bp2533417 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content60% 
IMG OID638141823 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_757550 
Protein GI114570870 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGGTA AACCGCATCT ATTCGCGGTC ATCGCCGCTA CTTTGGCCAT TACCGCTTGT 
GGCAATGGTG GGGACCGAGA CTCGGATCGT TCCTCCGCAA CGGAAGTGGA TCACGATGAT
GGCGAACAAT CTGCCCAAGT TGAGTTAAGC CCGGAGGTGG CGTCAGAGGC TGGCATTGTG
ACCGCGCGCG CGACACGTAC TCCCCTGAGA CAGTTTCTCT CTCTCCCGGC CGAGTTGAGG
TTTGATGCAG ATCGCGTCGC CGCAGTCTCA CCGCAAGTGA GCGGGCGGAT CATCCAAATT
ACAGCGACCG AAGGCGATCT CGTCTCTCCC AATGAATCGC TGGCAATCCT CTCCAGTCGT
GAACTCGCCG ACCTGAAGGC TGAGTTTCTG ACAGCCGCCA CTTCCGAAAA CCTTGCCCAG
CAAGCCCTGG CACGTGAGGA AACGCTTTTT GCAGAGCGAA TTACACCCGA GGCTGACCTG
CAGGCTGCCC GCGCTGCGCT CATCGCGGCC AGCGCCGCAC GCGAAGGCGT TGAGAACAAG
CTCATTGCTG TGGGCGTTCC TCGCAGTGAG CTCGCATCTC TCGGCGATGC GCCCGACCTA
ACACTCGCCC AGGCCCGCCT TCGGGCTCCC ATCGGCGGTG TGGTTGCGCG CCGAACAGCA
ATCCTTGGCG CAGCAGTATC GGCAGAAGAC GCAAGCGCCC CAGCTCTCTT CACCATTGTT
GATGACAGCG TCCTATGGGC TGACATAGCG GTCTACACGC AGGACGCAGC AATCGTTGAA
GCCGGCATGG CCGTCGTCCT TCGGTCAGAA ACGGGGGCTC AGTTAGCAGA AGGTGTGATT
TCGACCGTTT TGCCGACGAT AGACGAAACC TCGCGCATGG CGACCGCCCG CATGGTTGTG
GACAATTCTG ACCGGCGGAT GCGCCCCGGT CAGTTCGCAA CGGCTGAGAT TGCAACCGGG
GCCGACGAGA GCCGCCTCCA AGTGCCATCG GCGGCCATCG TTGAAGTTGC GGGTCGAACG
AGTCTGTTCG TTCCAACTGA TGACGGATTT GCGCCGCGGA CCGTGGAGCC GGGAACTGAA
TCCGGCAACC AGACCGTGAT CCTGTCTGGC CTCGATGAAG GAGAGTTCTA CGTGTCAGAG
GGTGCATTCA CGCTCAAAGC ACATCTCGAA AGAGACTCCT TCGGTGATGA TGACGACTAG
 
Protein sequence
MIGKPHLFAV IAATLAITAC GNGGDRDSDR SSATEVDHDD GEQSAQVELS PEVASEAGIV 
TARATRTPLR QFLSLPAELR FDADRVAAVS PQVSGRIIQI TATEGDLVSP NESLAILSSR
ELADLKAEFL TAATSENLAQ QALAREETLF AERITPEADL QAARAALIAA SAAREGVENK
LIAVGVPRSE LASLGDAPDL TLAQARLRAP IGGVVARRTA ILGAAVSAED ASAPALFTIV
DDSVLWADIA VYTQDAAIVE AGMAVVLRSE TGAQLAEGVI STVLPTIDET SRMATARMVV
DNSDRRMRPG QFATAEIATG ADESRLQVPS AAIVEVAGRT SLFVPTDDGF APRTVEPGTE
SGNQTVILSG LDEGEFYVSE GAFTLKAHLE RDSFGDDDD