| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2274 |
|---|
| Symbol | |
|---|
| ID | 4286740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 2478558 |
|---|
| End bp | 2479661 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638141776 |
|---|
| Product | 3-dehydroquinate synthase |
|---|
| Protein accession | YP_757504 |
|---|
| Protein GI | 114570824 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0337] 3-dehydroquinate synthetase |
|---|
| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.492898 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGACA TTCTGCGGGT CACCGTCGGC TTGGGAGACC GGGCCTATGA CGTGCTGGTC
GGCGCGGGCG CCCTTTCCGC AGCCGGTCCG GAACTGGTCG CCCATTTCCC GCGCGGCCGG
GCCATCCTGG TGACCGACCG GCATGTCGCC GACCTGCATC TCGACGCCGT GACCGCACAG
CTGAGCAGGC TGGGCCTGCG TGTCGAGCCG GTCATTATCG CCCCCGGCGA AACATCCAAG
AGCTGGGCCG GGCTGGAACA GGTCGTCGAC GCGCTTCTCG ATCGCAATAT CGAGCGATCC
GAAGCCGTGA TCGCGCTGGG TGGCGGTGTC ATTGGCGACC TGACCGGATT TGCGGCGGCG
GTGACCAAGC GCGGGGTCAA CTTCATCCAG ATTCCCACCA CCCTGCTCGC CCAGGTCGAC
AGCTCGGTTG GCGGCAAGAC CGGTATCAAT ACAACCCACG GCAAGAATTT CGCCGGTAGT
TTCCACCAGC CAAAGCTGGT GATCGCCGAT CGCGATCTGC TGGCAACGCT CCCGGACCGC
GAGCGCCGTG CCGGCTATGC GGAAATCGTC AAGGCCGCGC TGATCGGTGA TGCCCCGCTG
TTCGCGCAGC TGGAAGCCGC TGGCGCTGGC GTGCTGGACG GTGCCGACCT GGATCAGGCT
GTTGCAGCGG CGGTCGCCTT CAAGGCCCGG ATCGTCGCCG AGGACGAACG CGAAACAGGC
GTCCGCGCCC TGCTCAATCT GGGCCATACT TTCGGCCATG CCTTTGAAGC CGATGCGCCC
AAGGATGTGA TCCGGCATGG CGAGGCGGTC GCGGTCGGCA CGGCGCTGGC CTTTGCCTAT
TCCGCCCATC GCGGCGATTG CAGCGCCGAC CACGCGGCAC GCGTCGCGGC CCATTTGCGC
GCGGTCGGGC TGCCGGCCAG TCCCGCCGAA CTTGCGCACA GCGACTGGAA TGCCGCCAGC
CTCGTTTCCC GGATGCGCGA CGACAAGAAG AACCGCGACG GCCGCATCAC CCTCATCCTC
GCCCGCGCCA TCGGCGCAGC ATTCATTGAC CCGGCGGCCG ACGAAGCCGA CCTTCTCGCC
TTTATGGAGA CCCAGCTCTC ATGA
|
|---|
| Protein sequence | MSDILRVTVG LGDRAYDVLV GAGALSAAGP ELVAHFPRGR AILVTDRHVA DLHLDAVTAQ
LSRLGLRVEP VIIAPGETSK SWAGLEQVVD ALLDRNIERS EAVIALGGGV IGDLTGFAAA
VTKRGVNFIQ IPTTLLAQVD SSVGGKTGIN TTHGKNFAGS FHQPKLVIAD RDLLATLPDR
ERRAGYAEIV KAALIGDAPL FAQLEAAGAG VLDGADLDQA VAAAVAFKAR IVAEDERETG
VRALLNLGHT FGHAFEADAP KDVIRHGEAV AVGTALAFAY SAHRGDCSAD HAARVAAHLR
AVGLPASPAE LAHSDWNAAS LVSRMRDDKK NRDGRITLIL ARAIGAAFID PAADEADLLA
FMETQLS
|
|---|
| |