| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1432 |
|---|
| Symbol | |
|---|
| ID | 4285671 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1569688 |
|---|
| End bp | 1570416 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638140914 |
|---|
| Product | nuclear protein SET |
|---|
| Protein accession | YP_756662 |
|---|
| Protein GI | 114569982 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2940] Proteins containing SET domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0947387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0000000518275 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGT TTCTTGGAGC AACCAGAACG GCGTCAGTGC CGATTCATTT GATCGGTTTT
CATGTCACCG CCGACGGGAC GCGGCTGTAT GACCGTGCCG CGCTGCTGAT CGATACCGAC
GGCCGGGTCT CCGGCTCGGT CGAGCGCATC GCCGAGCGCG ACGGTGTGGC CCGGCCCGCC
GAGGCGCGCG GCATGGTGAT GGGCGACCGC CTCGCCCTGA TGCTGGAATT CGAGGGGCCG
GCAACGGGCA GTGCGGCTGG CGTGATGCTC GACCTCGGGC CGGCGCCCTG CCTGCACGGC
GAGGCGCTGG GCGGACGTAT CGCCGGTGCC GGTGGTAGCG GTGCCCTGCC CTATGTCATG
GCGCATGCGC CGGCGGTCCG GCTTGACCGG TCACCGACCC ATGGCTGGGG CAGCGTGCTG
GAACAGGCGG TGGCACGCGG TGAGGTCTTG CTGGGCATTG ACGGACCGGT CGGCGCCAGG
CAGACGCCCT ACTCCTTCCG CACCGATGAC AATCGCCATG TCGAGCCGAC CGGTTATGGC
CATTTCGTCA ATCATGCCTG CGAGCCAAGT TGCGAAATCG TCTATGACCT GGAGACCGCA
CTGCCGACCC TCGTGGCGCT GCGCGATCTG GCGGCCGGGG ATGAGGTGAC ATTTGACTAT
ACCCGCACCG AAGGCGCACT GGCCGGGTCT TTCGAGTGCC GCTGTCCGGC GCTCGTACAC
AAGGTTTAG
|
|---|
| Protein sequence | MTQFLGATRT ASVPIHLIGF HVTADGTRLY DRAALLIDTD GRVSGSVERI AERDGVARPA
EARGMVMGDR LALMLEFEGP ATGSAAGVML DLGPAPCLHG EALGGRIAGA GGSGALPYVM
AHAPAVRLDR SPTHGWGSVL EQAVARGEVL LGIDGPVGAR QTPYSFRTDD NRHVEPTGYG
HFVNHACEPS CEIVYDLETA LPTLVALRDL AAGDEVTFDY TRTEGALAGS FECRCPALVH
KV
|
|---|
| |