Gene Mmar10_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1117 
Symbol 
ID4285135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp1223124 
End bp1223759 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content67% 
IMG OID638140595 
ProductNADH dehydrogenase I chain E 
Protein accessionYP_756348 
Protein GI114569668 
COG category[S] Function unknown 
COG ID[COG3743] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.160144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value0.345455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTACC TGATCTGGGA AATGGGGATT TTGTTGTTGC TGGCGGTCGG GTTCGGCGTT 
TTCGTCGGCT ATCAACTCTG GTCCGGCGAT GCCCGCAGCG CCGAGGCAGA TGCCGCCGTG
GCCGAGAATG CCCGCCTGCG CCAGGAAAAC GAGAATCTCG CGCGCCGCCT TGGCGAGGCC
GAGGCCCAGT CCCGCGTGGC CGCAGCGGAT CCGTCGCCGG CTCGCGTCGA AGCGCCGGAG
ATCGCCATGC CGGAGACGGT CGTGCGCGAC GCTGCCACGG CCCCGTCGGC AACACCGAAG
CCGAAACCTG CCGCGAAACC CGCGCCAGCG AAGCCCTCAG CCGAGAAACC CTCAGCCGCG
AAGCCCAAAG CCGCCGCCAA GCCCAAAGCC AGCCCGAAGG CGAAATCGGC GCCGAAGCCT
GGCAAGCCAG CCGTCGAAGC CGGCGGTGAT CTTGGCGCGA TCAAAGGGCT CGGTCCCAAG
GCTGCTGCCG CGCTGAAAAC CGGTGGCGTG ACCTCGGTGG CCCAGATTGC CGCCTGGACG
GACGCGGACA TCGAGCGTTG GGACGCGGCC ATCAATGGTC GCGGCCGGAT TGTGCGGGAT
GACTGGGTCG GTCAGGCCAA AAAGCTCACC GGCTGA
 
Protein sequence
MFYLIWEMGI LLLLAVGFGV FVGYQLWSGD ARSAEADAAV AENARLRQEN ENLARRLGEA 
EAQSRVAAAD PSPARVEAPE IAMPETVVRD AATAPSATPK PKPAAKPAPA KPSAEKPSAA
KPKAAAKPKA SPKAKSAPKP GKPAVEAGGD LGAIKGLGPK AAAALKTGGV TSVAQIAAWT
DADIERWDAA INGRGRIVRD DWVGQAKKLT G