Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_0506 |
Symbol | |
ID | 4286723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | - |
Start bp | 595338 |
End bp | 596291 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638139971 |
Product | secretion protein HlyD family protein |
Protein accession | YP_755737 |
Protein GI | 114569057 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCC GTTCCGCACT CATCGCGCTC CTCCCGCTCG CCCAACTGGC CCTGGCCGGC TGCAGCGCGC CCGAAGACAG CGGGCTTGTC GGCTATGCCG AGGGCGATTT CATCCGCATC GCGCCGGACC AGCCGGGACG CATCACCGCG GCTGCCGCGG CCGAGGGCGA GCACGTGGTC GCCGGCAGCC TGCTGATCCG CCAGGACGAT ACCGCCGAAC GCGCCGCGCT GGCCGCCATT GAGGCGCGGA TCGATGCGGC GACCGCCCGC TATGACGATG CCCTCGCCGG CGCGCGCGAC CCGGAAATCG CCGCCGCCCG GGATCTGCTG CGCCAGGCGC TGGCCACCCA GGCCGAGGCC GACCAGGCGC GCGACCGCAA CCAGGCCCTG TTTGCCGATG GCCATATCAG CCAGGCCCGG CTCGACACCG CCATCGCGGC CGCCCGGGCG GCCGATGCCC GCGTCGACGA AATGCGCCAG CGGCTCAACA TCGTCCAGCT GCCTGCCCGA TCCGACCAGC TGCGCGCCCT GCAGGCCGAG ATCGCGGCGG CCGAGGCCGA GCGTGAAGGT GCCGTATACC GGCTGACCCT GCGCACCGTC ACGGCGCCGG CGGACGCCCG CATCCATCGC CAGCTCCGCT TCGCCGGCGA ACAGGCGGGA CCGACCGCGC CGGTCTATGA ACTTCTGCCG GACGGTGCGG TCCATGCCGT CCTCTTCATT CCGGAAACGG AGCTGGCGGG CCTGCCGGTC GGTACTCGGC TCGCCGTGGA GTGCGACGCG TGCGGTGCCG GTTTGATGGC CACGATCGCG ACGATTGATG ACGCCGCCGA ATTCACCCCG CCCATCCTCT ATTCGGACTC CTCGCGGGCG CGTCTCGTCT TCCGCGCCGA AGCCCGTTTC GACGACACAC CGCCGCCGCC GGGCACACCG CTCTTCTTCG AGCCGCGCCC ATGA
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Protein sequence | MITRSALIAL LPLAQLALAG CSAPEDSGLV GYAEGDFIRI APDQPGRITA AAAAEGEHVV AGSLLIRQDD TAERAALAAI EARIDAATAR YDDALAGARD PEIAAARDLL RQALATQAEA DQARDRNQAL FADGHISQAR LDTAIAAARA ADARVDEMRQ RLNIVQLPAR SDQLRALQAE IAAAEAEREG AVYRLTLRTV TAPADARIHR QLRFAGEQAG PTAPVYELLP DGAVHAVLFI PETELAGLPV GTRLAVECDA CGAGLMATIA TIDDAAEFTP PILYSDSSRA RLVFRAEARF DDTPPPPGTP LFFEPRP
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