| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlg_2256 |
|---|
| Symbol | |
|---|
| ID | 4269197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alkalilimnicola ehrlichii MLHE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008340 |
|---|
| Strand | + |
|---|
| Start bp | 2556825 |
|---|
| End bp | 2558264 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 638127013 |
|---|
| Product | deoxyribodipyrimidine photo-lyase type I |
|---|
| Protein accession | YP_743088 |
|---|
| Protein GI | 114321405 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0415] Deoxyribodipyrimidine photolyase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.786952 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGATG CCACCCTGGT CTGGCTGCGA CGCGACCTGC GCCTGACCGA CAACCCGGCC
CTCGACCAGG CCGCCCGGCG GGGCGGGCCG GTGATCGCGG TCTATCTCCA CGCGCCGGAG
GAGACCCCGC AGTACCCGCC CGGAGCCGCC AGCCACTGGT ACCTGCACCA CAGCCTCAAG
GCCCTGGGCC CGGCCCTGGC CCAGGCGGGC ATCCCACTGG TGCTGCGCCG CGGCCCGGCC
CTGGCGACCC TGCGGGCGCT GATCCGCGCC ACGGGCGCCG GCGCAGTCTA CTGGAACCGG
CTTTACGAGC CCGATGCCGT GGCCCGCGAT CGGACGGTGA AACAGGCGCT GCGCACGGAG
GGCCTCGACT GCCGCAGCTT CCCGACCGCC CTGCTGCACG AACCCTGGGC CGTGCGTAAT
CAGGCCGACC GGCCCTACCG GGCCTTCACC CCCTTCTGGC GCGCCTGCCG CCGCCAGCCG
CCGCCGGCGG CACCCCTGCC CGCCCCCGAC CTGCGCGACC GTCCGGTGCC GGCGGTGGAG
GGCCTCGACC TGGCGGCGCT GGGGCTGCTG CCCCGCACCC CCTGGGACAC CGGGCTGCGC
AACACCTGGC AGGCCGGCGA GTCGGCCGCG CTGGCCCGGC TGGAGGCCTT CGCCGCCGAC
CGGCTGGCGC GCTATGCCCA GGACCGGGAC CGACCCGCCG AGCCCGGCAC CTCCGGCCTG
TCACCGGCGC TGCACTTCGG CGAGCTCTCG CCGCGCCAGG TCTGGTGGCA GGTAATGGCG
GCACGCGAGG CCGGGGTGCC CGAGGATGCC TGCGAGACCT TCCTCTCCGA GCTGGGCTGG
CGCGAGTTCG CCCACCACCT GCTCTGGTCC CACCCGGATC TGGGGGACGC CCCGGTGGAT
GACCGCTTCG GCGCTTTCCC TTGGCGCCCC GACCCCGGCG ATGGATGGCT GCACGCCTGG
CAGGCCGGCC GCACCGGCAT TCCGCTGGTG GACGCCGGCA TGCACGAACT CTGGCAAACG
GGCTGGATGC ACAACCGGGT GCGCATGGTG ACCGGCTCGT TCCTGGTCAA GCACCTGCGA
CTGCCCTGGC AGCGGGGCGA GCGCTGGTTC CGGGACACCC TGGTGGACTG GGATGCGGCC
AGCAACGCCA TGGGCTGGCA GTGGGTGGCC GGCTGCGGGG CCGACGCCGC GCCCTACTTC
CGGATCTTCA ACCCGGTGCG CCAGGGTGAG CGCTTCGACC CCCAGGGGCG CTACGTGCGC
CGCTGGCTGC CGGCCCTGGC CAACCTCCCC GACAAATACA TTCACGCCCC CTGGACGGCG
CCCGAGGCGG TGCTGCGCCG GGCCGGGGTC ACCCTGGGGT CCGACTACCC GTGCCCGCTG
ATCGACCTGC GGCTGGGCCG GGAACAGGCC CTGTCCGCCT TCCAGGCCAT CAAGGGCTGA
|
|---|
| Protein sequence | MGDATLVWLR RDLRLTDNPA LDQAARRGGP VIAVYLHAPE ETPQYPPGAA SHWYLHHSLK
ALGPALAQAG IPLVLRRGPA LATLRALIRA TGAGAVYWNR LYEPDAVARD RTVKQALRTE
GLDCRSFPTA LLHEPWAVRN QADRPYRAFT PFWRACRRQP PPAAPLPAPD LRDRPVPAVE
GLDLAALGLL PRTPWDTGLR NTWQAGESAA LARLEAFAAD RLARYAQDRD RPAEPGTSGL
SPALHFGELS PRQVWWQVMA AREAGVPEDA CETFLSELGW REFAHHLLWS HPDLGDAPVD
DRFGAFPWRP DPGDGWLHAW QAGRTGIPLV DAGMHELWQT GWMHNRVRMV TGSFLVKHLR
LPWQRGERWF RDTLVDWDAA SNAMGWQWVA GCGADAAPYF RIFNPVRQGE RFDPQGRYVR
RWLPALANLP DKYIHAPWTA PEAVLRRAGV TLGSDYPCPL IDLRLGREQA LSAFQAIKG
|
|---|
| |