Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlg_2185 |
Symbol | |
ID | 4270964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Alkalilimnicola ehrlichii MLHE-1 |
Kingdom | Bacteria |
Replicon accession | NC_008340 |
Strand | + |
Start bp | 2484174 |
End bp | 2490701 |
Gene Length | 6528 bp |
Protein Length | 2175 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638126941 |
Product | excinuclease ABC, A subunit |
Protein accession | YP_743017 |
Protein GI | 114321334 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.124158 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGCG ACTGCATCCG GGTGCGTGGT GCCCGCCAGA ACAACCTGCG GGGCTTCGAC CTGGACATCC CCTTGGGCGA GCTGGTGGTG ATCACCGGGG TCTCCGGCTC GGGCAAGTCC TCGCTGGCCT TCGACACCGT CTATGCCGAG GGTCAGCGCC GCTACGTGGA GACCTTCTCC CCCTACGCCC GGCAGTTCCT GGACCGCATG GACCGCCCGG CGGTGGACCG CATCGACGGC GTGCTGCCCG CCATCGCCAT CGACCAGACC AACCCGGTGC GCACCTCCCG CTCCACCGTG GGCACCATGA CCGAGCTGAA CGACCACCTG AAGCTGCTCT TCGCCCGCAC CGCCCAGCTC TACTGCGGCG GCTGCGGCAA GCGCGTCCAG CGCGACACCG CCGAGGGGGT GGCGGCCCGC CTGCTGGCTG GCCACGCCGG CGAGCGCGCG ATGGTCACCG CCCGGGTCGC CATCCCCAAA AAATCCAGCG CCGACACCCT GCGTGAGCTG CTCGCCGGTC AGGGTTACAC CCGCATCCAC GGCGAGGACC GCACCCACCT GGAGGTGGTG ACCGACCGCA TCCGGCTGGT GCCGGACCGC CGCGACCGCC TGGTGGAGGC CCTGGAGTCG GGCCTGAAGC TGGGCCGGGG CCACATCCAG GTGCGCCTGC TGGATGAAAA CCGCGAACCC GGCAAGCCCC TGCGCTACTC CGCCGACCTG CACTGCGCCG ACTGCGACAT CCACTACGAC GACCCCACCC CCGGGCTCTT CTCCTTCAAC TCCCCGGTGG GCGCCTGTGA GACCTGCCGC GGCTTCGGCC GGGTGATGGG CATCGACTAC CGCCTCGTCA TCCCGGATGA CGCCCTCAGC CTCGAAGCCG GCGCCATCAA GCCCTTCCAG TCCGGCCGCT CCGCCGAGTG CCAGGACGAC CTGCTGTTCC ACGCCCGCCG CCGGGGCGTG GCCACCGACA TCCCCTTCCG CGACCTGCCG GAGGCCGACC GGCAATGGAT CATCCAGGGG GAAGGCAAAT TCAACGGCCG CAAGTGGTAC GGCGTCGATG GTTACTTCCA GTATCTGGAG CGCAAGAGCT ACAAGATGCA CGTGCGCGTG CTACTCAGCC GCTACCGCAG CTACGACCCC TGCCCCGACT GCCACGGCGC CCGCCTCAAG CCCGGCGCCC TGCTCTGGCG CATCGGCAAC CACGAAGACA GCGACGCCGT CATCGACCGC GCCGAGCGCC ACCGCCCCCA CGGCGCCACC CTGCCCGAAC ACGCCCTCCA CGGCCTGCCC GGCCTGCACC TGCACGACGT CCTCACCCTG CCGCTGGACC GCTGCGCCCG CTTCTTCCAG GACATCCACC TGCCCGCCCC GCTGGACGAG GCGGCGGAGA TCCTGCTGGA GGGCATCCGC AACCGCCTCA CCTACCTCAA CACCGTCGGC CTGGGCTACC TCACCCTCGA CCGCCAGTCC CGCACCCTCT CCGGCGGCGA AGTCCAGCGC ATCAACCTCA CCACCGCCCT GGGCACGGCC CTGGTCAACA CCCTCTTCGT CCTAGACGAG CCCTCCATCG GCCTCCACCC GCGGGACATC GACCGCATCG TCACCGTCAT GCACCGCTTA CGCGACGCCG GCAACTCCCT GCTCGTGGTG GAACACGACC CGGCCGTGAT GCAGGCGGCC GACCGCCTCA TCGACATCGG CCCCGGCCCC GGCGAACGCG GCGGCCAGAT CACCTTCAAC GGCACCCCCG CCGAACTGCT ACGCACCGAA AACTCCCTCA CCGCCGACTA CCTCACCGGC CGAAGACAGG TGGTGCCGAC AAATGCACGC CCTGATCGCT ATGGCCACAA CGACGCAGAC GCTGGGCCTG GCGAGTCCGG CGAGTCCGGC GAGTCCGGCG AGTCCGGCGA GTCCGGCGAG TCCGGCGAGT CCGGCGAGTC CGGCGAGTCC GGCGAGTCCG GCGAGTCCGG CAGCCGAGTT TGTAACAAAG CAGGGACACG ACTCCAGGAG CGCAAGGCCG AGGGCAACGC GCCTGCCGAG AGCGGTTCGT GTTCCGGGCG GAACCGTAAA GACGCGTGGG GGGAAGGCGG AGCCCCGAAC CCCGCAGGGC CTGGCGGTGA TGGCGGGTGG GTTCGTAGCG GAGCGCGGGC GCAGGGCGGA GAAGGCCCGA AGGGTGGCCG CAGGGATGCG GCCACCGGCC GTCAGGCCAT GGATGGCCTG TCGGCCGGCC CCGCCCGGAG CCCGGAGAAG CGGAGCTCCG AACCCACCCG CCATCACCGC CAGGCCCCCG ACTCCGAGCC AAATAACGGC TCCAGCCAAG CCGTGACCCC GCTACCGCCT GACACCCCCA AGGTCACGAT CCAGGGCGCA ACCGAACACA ACCTCCAGCA CCTGACCGTG GAAATCCCCG TCCACCCCGC CCTAGTCTGC CTCACCGGCG TCTCCGGCTC CGGCAAATCC ACCCTCATGC GCGACATCCT CCACAACGAA CTCGCCCGCC GCAAAGGCCA CCCCGGCGAC CCACCCGGCG CCTTCCAAAC CCTCACCGGC GACGAACACA TCGACAACGT GGTGCTGGTC GACCAATCCC CCATCGGCAA GACCACCCGC TCCAACCCCG CCAGCTACAC CGGCGCCTTC GAACCCATCC GCAAGGCCTA CGCCGCCGAA CCCCTCGCCC GGGAACGCCA ATACACCCCC GGCGTCTTCA GCTTCAACTC CGGCAAGGGC CGCTGCCCCA CCTGCGGCGG CAACGGCTTC GAACACGTGG AGATGCAATT CCTCTCCGAC GTCTACCTGC GCTGCCCCGA CTGCAACGGC AGCCGGTACC GCCCGGAAAT CCTCGAGATC CAGCGCCTGC CCGACCCCGG GGCCGACCTG GGCACCGCCG GCGACGGCCC CAGGCACATC GCCGAAATCC TGGACCTGAC CGTGGACCAG GCCACCGAGT TCTTCCGCAC CACCCCGGCC GTGCTGCGCA GCCTGGAACC GCTGCAGGCC GTGGGCCTGG GCTACCTGAA ACTGGGCCAG CCGGTCCCCA CCCTGTCCGG GGGCGAGGCC CAGCGGCTGA AACTGGCCGG GCACCTGGCC AAGACCAGCG GCCGGCGCAA GCAACAACAA CGGCTGCTGT TCCTGTTTGA CGAACCCACC ACTGGGCTGC ACTTCCACGA CGTGGCCGTG CTGCTCAGCG CCTTCCGGCG GCTGCAGGAC GAGGGCCACG CGCTGCTGGT CATCGAACAC AACCTGGACG TGATGCGGGC GGCGGACTGG ATCATCGACC TGGGGCCGGA GGGGGGCGAC CGGGGCGGCC GGCTGGTCTG CACCGGCACA CCGGAACAGA TCATGGCGCA AAGCGACCTC TCCCACACCG GGCGGGCGCT GGCCGAGTAC ACCGGGGCAC TAGAGCGCCT CCGTACGACA GCGGAGGCTT CGGAGGGGGC GGCTTCGGGC GAACCCGGGC CGGGGATGTC CGGCAGGGGG ACGCAGCACT ACATCGACAT CCACCACGCC CGCGAGCACA ACCTTAAGGG CGTGGACATC CGCATCCCGC GCAACCGGCT CACGGTCATC ACCGGCCTGT CCGGCTCCGG CAAGTCCACC GTCGCCTTCG ACATCCTCTT CAACGAAGGC CAGCGCCGCT ACCTGGAGTC ACTCAACGCC TACGCCCGCC AGTTCGTGCA ACCGGCGGCG CGCCCCGACG TGGACAGCGT CGAGGGCATC CCGCCCACCG TCGCCATCGA ACAGCGCACC AGCCGCGGCG GGCGCAAGAG CACCGTCGCC ACCCTGACCG AGCTGCACCA CTTCCTGCGC CTGCTCTACG CCCGCCTCGG CACCTGGCAC TGCCCCGCCT GCCAGGTGCC CATCCAGGCC CAGACCCCCG AGGCCATCCA CGCCCAGCTT CTGCGCGAGC ACCGCGGCGA GACCCTGCAC CTGCTGGCCC CCATGGTCAG CGGCCGCAAG GGCATCTACA AGGAACTGGC CCGCTGGGCC GCGGGCAAGG GCGTCGGGCA CCTCTACGTG GACGGCGAAT TCCTGCCCAC CGCCGACTGG CCGAAACTCG ACCGCTACCG GGAACACGAC ATCGACCTGC CCGTGGCCGA ACTGCGCATC GAACCGGAAA ACGCCCAACC CCTGCGCCAG GCCATCGCCC GGGCCCTGGA ACAAGGCAAA GGCGTCCTGC GCATCCTCAC CGCCGAACGA ACCCTGCAGA CCCTCTCCAC CGAACGGGCC TGCCCCAGCT GCCAACGCAG CTTCGACGAA CCCGACCCGC GCCAGTTCTC CTACAACAGC CCCCACGGCT GGTGCCCCAC CTGCTACGGC ACCGGCGAGG TGTTGGAAGG CTTCAGCGAC GAGGACAGCG GCGAAGAGCG CCACTGGCGG GAGACCGAAA GCGACGACGA CGCCCTCCCC GCCCCCTGCC CCACCTGCAA CGGCACCCGC CTCAACGCCG AGGCCCGCGC CGTCACCTTC CAGGGCCGCA CCCTCCCCGA ACTCTCCGCC CTCACCGTCC GCGAGGCCAG GGCCTGGTTC CGGGTAATGC GCGCCCACTC CCCCCAGCCT GGACCAAAGG AAATCGAAGT CGATGACCCC GAAGCTGCCG AGCGGGGTGG GGGGCGGAGC ACGCCGGTGC CTAGCGGAGC GCGGCCCGCT GGCGGATCAG GCCCGAAGGG TGGCCGCAGG GGTGAGGCGG AAACAGATCG GTGTCCAGTG GACACCGATC CCGCCGAACG GGCGGGCCAC GGATGGCTCG CCCCGGCCCT GCCAGCAGCG CAGGATAGCG CTGCTGAGCA GGCGGCCACC GACCGTCAGG CCAGGGATGG CCTGTCGGTC GGCCCCGCCA GCGGGACGGA GAAGCGCAGC TCGGCACCGG CGCGCTCCGC CCCCCACCCC GCGTCCAACC CCGTCGAAGT CGCACCACCA AACGCACATG GGCCCGGAAA CGATAATGCA GAACCCTTGG CATTGACGGA CCGCGAGGCC ACCATCGCCC GCGACGTCCT CCCGGAAATC CACCACCGCC TCCGCTTCCT GGAAGACGTC GGCCTCGGCT ACCTCAGCCT CGACCGCGCC GCCCCCACCC TCTCCGGCGG CGAAGCCCAA CGCATCCGCC TCGCCGCCCA ACTGGGCTCA AACCTCCAGG GCGTCTGCTA CGTCATGGAC GAACCCACCA TCGGCCTCCA CCCCCGCGAC AACCGCCTGC TCCTCGACGT CCTCGCCCGC CTCGAAGGCA AAGGCAACAC CATCGTCGTC GTCGAACACG ACGAAGACAC CATCCGCCGC GCCGAACACA TCATCGACCT GGGCCCCGGC GCCGGCATCA ACGGCGGCCG GGTCGTCGCC GCCGGCACCG TCGAGCAACT GCTGCAACAC CCCCGCTCCA TCACCGGCCG CTACCTCCGC CACCCCCTGC ACCACCCCCT GCGCGGCCAG CGGCGAACCG TCAGCCTGGC CACCACCCCG GCAGGGTCCC ACCCGCAACC GACAACGCCG GCCGAGCACG ACGTCCTGAC CCTGCACGCC CCTACCCTGC ACAACCTCCA GGGCCACGAC CTACACCTGC CCCTGGGCCG CCTCATGGTC GTGACCGGCG TCTCCGGCTC CGGCAAATCC TCCCTCATCC GCGGCGTCCT CAAACCCGCC CTGAAACGCC TGCTGAGCCG CAAACGGGAC CAGGCGACCC CACCACTGCC CCACTGCGCC GGCCTGGATG GCTGGCAGGC CGTCGACCGC GTGCTGGAGG TGGACCAGAC CCCCATTGGC AAGACCCCGC GCTCCTGCCC CGCCACCTAC ATCGGCTTCT GGGACGACAT CCGCAAGCTC TACGCCGGCA CCCAGGAGGC CAGCCTGCGC GGCTACGGCC CCGGCCGCTT CTCCTTCAAC ACCAAAGACG GCCGCTGCCC TGACTGCGAC GGCCAGGGCG TACGCCGGAT CGAGATGAAC TTCCTGCCCG ACGTCACCGT ACCCTGCGAG ACCTGCCACG GACTGCGCTT CACCCGCGAG ACCCTGGCCG TGGAATGGAA AGGCCGGCAC ATCGGCGACG TACTCAACAT GAGCGTGGAA GAGGCCACCG CCTTCTTCGC CGCGCAACCG CGCATCCACC ACCCGCTCAC ACTGCTCGAG GCCGTCGGCC TGGGCTACCT CACCCTGGGC CAGGCCAGCC CCACCCTCTC CGGGGGCGAG GCCCAGCGCA TCAAACTGGT CACCGAACTG GCCAAGGCCC GCCCCGACCT GCGCGCCCAG CGTACCCCCC ACACCCTCTA CGTCCTGGAC GAGCCCACCG TGGGCCTGCA CATGGCAGAC GTGGAGCGAC TCATCGACGC CCTGCAGCGG CTGGTGGACG CCGGCCACAC CGTGGTGGTC ATCGAACACA ACCTCGATCT CATCGCCGAG GCGGACTGGG TGGTGGACAT CGGTCCGGAG GGGGGCGACG CCGGCGGCCG GGTGGTCGCC GCCGGGCCGC CCGAGGCCGT GGCCGCCGGG TCGACCGCGA CCGGACGCTT CCTGGCGGAG GTGTTGAAGC GGAAGTAA
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Protein sequence | MSRDCIRVRG ARQNNLRGFD LDIPLGELVV ITGVSGSGKS SLAFDTVYAE GQRRYVETFS PYARQFLDRM DRPAVDRIDG VLPAIAIDQT NPVRTSRSTV GTMTELNDHL KLLFARTAQL YCGGCGKRVQ RDTAEGVAAR LLAGHAGERA MVTARVAIPK KSSADTLREL LAGQGYTRIH GEDRTHLEVV TDRIRLVPDR RDRLVEALES GLKLGRGHIQ VRLLDENREP GKPLRYSADL HCADCDIHYD DPTPGLFSFN SPVGACETCR GFGRVMGIDY RLVIPDDALS LEAGAIKPFQ SGRSAECQDD LLFHARRRGV ATDIPFRDLP EADRQWIIQG EGKFNGRKWY GVDGYFQYLE RKSYKMHVRV LLSRYRSYDP CPDCHGARLK PGALLWRIGN HEDSDAVIDR AERHRPHGAT LPEHALHGLP GLHLHDVLTL PLDRCARFFQ DIHLPAPLDE AAEILLEGIR NRLTYLNTVG LGYLTLDRQS RTLSGGEVQR INLTTALGTA LVNTLFVLDE PSIGLHPRDI DRIVTVMHRL RDAGNSLLVV EHDPAVMQAA DRLIDIGPGP GERGGQITFN GTPAELLRTE NSLTADYLTG RRQVVPTNAR PDRYGHNDAD AGPGESGESG ESGESGESGE SGESGESGES GESGESGSRV CNKAGTRLQE RKAEGNAPAE SGSCSGRNRK DAWGEGGAPN PAGPGGDGGW VRSGARAQGG EGPKGGRRDA ATGRQAMDGL SAGPARSPEK RSSEPTRHHR QAPDSEPNNG SSQAVTPLPP DTPKVTIQGA TEHNLQHLTV EIPVHPALVC LTGVSGSGKS TLMRDILHNE LARRKGHPGD PPGAFQTLTG DEHIDNVVLV DQSPIGKTTR SNPASYTGAF EPIRKAYAAE PLARERQYTP GVFSFNSGKG RCPTCGGNGF EHVEMQFLSD VYLRCPDCNG SRYRPEILEI QRLPDPGADL GTAGDGPRHI AEILDLTVDQ ATEFFRTTPA VLRSLEPLQA VGLGYLKLGQ PVPTLSGGEA QRLKLAGHLA KTSGRRKQQQ RLLFLFDEPT TGLHFHDVAV LLSAFRRLQD EGHALLVIEH NLDVMRAADW IIDLGPEGGD RGGRLVCTGT PEQIMAQSDL SHTGRALAEY TGALERLRTT AEASEGAASG EPGPGMSGRG TQHYIDIHHA REHNLKGVDI RIPRNRLTVI TGLSGSGKST VAFDILFNEG QRRYLESLNA YARQFVQPAA RPDVDSVEGI PPTVAIEQRT SRGGRKSTVA TLTELHHFLR LLYARLGTWH CPACQVPIQA QTPEAIHAQL LREHRGETLH LLAPMVSGRK GIYKELARWA AGKGVGHLYV DGEFLPTADW PKLDRYREHD IDLPVAELRI EPENAQPLRQ AIARALEQGK GVLRILTAER TLQTLSTERA CPSCQRSFDE PDPRQFSYNS PHGWCPTCYG TGEVLEGFSD EDSGEERHWR ETESDDDALP APCPTCNGTR LNAEARAVTF QGRTLPELSA LTVREARAWF RVMRAHSPQP GPKEIEVDDP EAAERGGGRS TPVPSGARPA GGSGPKGGRR GEAETDRCPV DTDPAERAGH GWLAPALPAA QDSAAEQAAT DRQARDGLSV GPASGTEKRS SAPARSAPHP ASNPVEVAPP NAHGPGNDNA EPLALTDREA TIARDVLPEI HHRLRFLEDV GLGYLSLDRA APTLSGGEAQ RIRLAAQLGS NLQGVCYVMD EPTIGLHPRD NRLLLDVLAR LEGKGNTIVV VEHDEDTIRR AEHIIDLGPG AGINGGRVVA AGTVEQLLQH PRSITGRYLR HPLHHPLRGQ RRTVSLATTP AGSHPQPTTP AEHDVLTLHA PTLHNLQGHD LHLPLGRLMV VTGVSGSGKS SLIRGVLKPA LKRLLSRKRD QATPPLPHCA GLDGWQAVDR VLEVDQTPIG KTPRSCPATY IGFWDDIRKL YAGTQEASLR GYGPGRFSFN TKDGRCPDCD GQGVRRIEMN FLPDVTVPCE TCHGLRFTRE TLAVEWKGRH IGDVLNMSVE EATAFFAAQP RIHHPLTLLE AVGLGYLTLG QASPTLSGGE AQRIKLVTEL AKARPDLRAQ RTPHTLYVLD EPTVGLHMAD VERLIDALQR LVDAGHTVVV IEHNLDLIAE ADWVVDIGPE GGDAGGRVVA AGPPEAVAAG STATGRFLAE VLKRK
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