| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1665 |
|---|
| Symbol | |
|---|
| ID | 4794658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1699015 |
|---|
| End bp | 1699773 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640100355 |
|---|
| Product | isopentenyl-diphosphate delta-isomerase |
|---|
| Protein accession | YP_001031093 |
|---|
| Protein GI | 124486477 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1712] Predicted dinucleotide-utilizing enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.643155 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000000000624086 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATTACCG TCGGGCTTTT AGGGTGCGGA AATATCGGTC ACGTGATCGC AAAGAGTCAG
GAAAACTTCA AAATTACTGC AGTATACGAT GTGGTTTTTG AACGTGCAGA GGCATTCGGC
AGAGAGTTCG GCGCATCCCC CTACTCGGAT TTTTCCGAAT TTCTGAAAGA GCCGACCGAT
ATCGTCGTCG AGGCGGCATC CGTTGCGGCG GCCACGTCCC ATGCAGAGAG TATTCTTCTT
GCGGGAAAAG ATCTTGTCAT CATGAGTGTA GGAGCACTTG CAGACATCTC TTTCCGCGAA
GAACTCATCC AGACCGCCCG CGAGATGAAG AAAAAGATCC ACATCCCATC AGGCGCCATC
ATGGGACTGG ACAATATCCG CGTCGGACAG ATCTCGTCGA TCGACAAGTT CGTGCTCCGC
ACAACGAAAA ATCCCAAATC CCTTTCGCGT GAGGCCGAGG AAAAGACCTG TATCTTTACC
GGCAAAGCCT ACGACTGCGT CCACCAGTAT CCGAAGAACA CGAACGTCGC CGAGTCCCTT
TCGATCGCCT GCGGCAGAGA TGTGGATGTC GAACTGTGGA TGGATCCGAA TGAGGACCGG
AACATGCATG AGATCTTCTT CGAAGGAGAG TTCGGCGAGG CATACATACG CGTCAGAAAC
GTCCCGTCCC CGGATAATCC GGCAACGAGT TATCTTGCGG CCCTTTCGAT CCTCTCGCTT
TTGAAAAATC TTGACAATCC GCTGGTGATA GGCGCATGA
|
|---|
| Protein sequence | MITVGLLGCG NIGHVIAKSQ ENFKITAVYD VVFERAEAFG REFGASPYSD FSEFLKEPTD
IVVEAASVAA ATSHAESILL AGKDLVIMSV GALADISFRE ELIQTAREMK KKIHIPSGAI
MGLDNIRVGQ ISSIDKFVLR TTKNPKSLSR EAEEKTCIFT GKAYDCVHQY PKNTNVAESL
SIACGRDVDV ELWMDPNEDR NMHEIFFEGE FGEAYIRVRN VPSPDNPATS YLAALSILSL
LKNLDNPLVI GA
|
|---|
| |