| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_1458 |
|---|
| Symbol | |
|---|
| ID | 4795739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 1492270 |
|---|
| End bp | 1494147 |
|---|
| Gene Length | 1878 bp |
|---|
| Protein Length | 625 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640100143 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001030890 |
|---|
| Protein GI | 124486274 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1955] Archaeal flagella assembly protein J |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.441143 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAATC CCTTAACTCC ATCTCCGGAA CGCATTCGAG CTCTTGAAAA GGAACTCTTT
TCGGCCCGTA TCGATATCGA TGTCAAGGGA CTCGTTCGTT ATGCACGGGT ATTTGGTTTC
ATTGCCAGTA TTCTCATTGT TTTCGCCCTC ATCGTTATCG ATGTTTTCTT CTTTCCGGTT
GCAAATCTGT TCACGGACCC GGAGTATATC ATCTTCACGT ATCCTCTGAC GGCCGGGATC
GCTGTTCTTG CTAATGTTGC CGTCTATTAT GCCATTATCT CCTACCCGAA GCTGGAAATG
CGGAGCCGGA AACGGTTCAT CGAAGCATCC ATGTATGAAA TGGTATCGTT CATGTATGCT
CTGCACCACT GCGGGGCAAC CCTGTATGCA TCCGTTCATT CCATTGCCAA GTATGCGGAT
TTCTACGGCG ATGCAGCAAA AGAGTTCCGT CAGGTAGTTT CCGATATGGA TTTCTGCGGC
TATGACCAGT TCACTGCCAT CCAGCGGCTT GCCGATACCA CGCCTTCCGA CAAACTTCGG
TTCTTCCTGT CGGAATTGTC TTCAACGTAC CGGTCGATCG GTAATGCCGA AGTGTTTCTG
CACGGCAAAC TTCAGGAGAT GCAAAAAGAG AGCGAGGTAG CTCAGAGAAG CTACCTCTCC
TCGCTTGGGG CGATCGCCGA GATGTATATC ACCCTTTTCG TCGCGGGTCC TCTGTTCGTG
GTGATCGTTA TTATGGTCAT TGGGCTCATC TCGGGGTCGG ACCCGATGAT CCTTGCGATC
GTCGTTTATC TGATGCTTCC GATTGGAACG GTGATTTTCC TCCTTCTTCT GGATGCTCTC
GGCCAGACCT ACATCATCAA ACGCGTTCAG ATGCCAAGGT CAACAGTGCC TCTGTATCCT
CAGCTTACAA TAGTGGAAGC AGAAGAGGAT GAAACACCCC TCTTTGAAAA ACTGAAAAAA
TACGACAAAC GCCTGAAATA CATGGAGTTC ATTCGTCACC CGCGGCTGGC TATTCGTGAG
GAACCGGCGC TTGTTTTCGT GTTCAGTATC CCTCTGTCGC TGATAACGGG TGTTGTTCTT
TACGTTTCCA CGGTAAAGGT ATTCTTCAAT CCGTATATGA TCTATCAATG GGGTATGGCC
GTCGATGACG TGGTCGTGGT CATGCTTTTG GTAGCTCTCA TGCCGTATGC AATAAGCTAC
CGGAATTACG TCCGCAGAAT AGATAAGGTG GAAGGCGCTC TTCCCGATTT CTGCAGGCAG
CTGAGTTCTC TGGTAAAGTA CAATATGACG CTGACCCACG CCATTGAACT CACCGCACAG
GAAGGAAAAA GTTACATACA AGAGGATATC CGCATTCTTT CCCGTGATCT TCTGTGGGGC
GAGAAGCTTT CTTCCGCATT AAAGCGGTTT GCGGACCGTA TGAAAAATCT GTCCGTCGAC
CGTCTGGTCA TTCTCCTCTC CCAGACCGAG CATTTCACAA ATGATCTATC GCTTACGATC
GACCTGCAGT ATCATGAAGC GAAGGCCCGC GAGTCTCTGA AAAGGGAAAG AAAGAGCGAC
ATGGGCGTGT ATGTCGTCAT CGTTTTCATG GCGTTCGCGG TATTTGTGTT CGTTCAGGTC
ATCATGTCGG AGGTTTTTCT CAATATTATG ATGGAAAATT CCGAAGCTCT CTCGTATCTC
AGCTCCAGTT CGGGAGCCGG GTTTCCCGCC CAGACGTATC AGATGATCAT TTATCATTCG
ATCCTTATTC ACGGATTCTG TTCCGGGCTT GTGGCCGGTA TGATGGGTAC GGGCTCTATT
AAAGGGGGTA TCCAGTATTC GTGTATTATG CTCGCTCTTG GAGCCATCGC ATTTATCGTT
ATTAGCATGG TTATGTAG
|
|---|
| Protein sequence | MRNPLTPSPE RIRALEKELF SARIDIDVKG LVRYARVFGF IASILIVFAL IVIDVFFFPV
ANLFTDPEYI IFTYPLTAGI AVLANVAVYY AIISYPKLEM RSRKRFIEAS MYEMVSFMYA
LHHCGATLYA SVHSIAKYAD FYGDAAKEFR QVVSDMDFCG YDQFTAIQRL ADTTPSDKLR
FFLSELSSTY RSIGNAEVFL HGKLQEMQKE SEVAQRSYLS SLGAIAEMYI TLFVAGPLFV
VIVIMVIGLI SGSDPMILAI VVYLMLPIGT VIFLLLLDAL GQTYIIKRVQ MPRSTVPLYP
QLTIVEAEED ETPLFEKLKK YDKRLKYMEF IRHPRLAIRE EPALVFVFSI PLSLITGVVL
YVSTVKVFFN PYMIYQWGMA VDDVVVVMLL VALMPYAISY RNYVRRIDKV EGALPDFCRQ
LSSLVKYNMT LTHAIELTAQ EGKSYIQEDI RILSRDLLWG EKLSSALKRF ADRMKNLSVD
RLVILLSQTE HFTNDLSLTI DLQYHEAKAR ESLKRERKSD MGVYVVIVFM AFAVFVFVQV
IMSEVFLNIM MENSEALSYL SSSSGAGFPA QTYQMIIYHS ILIHGFCSGL VAGMMGTGSI
KGGIQYSCIM LALGAIAFIV ISMVM
|
|---|
| |