Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mlab_0936 |
Symbol | uvrC |
ID | 4795074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanocorpusculum labreanum Z |
Kingdom | Archaea |
Replicon accession | NC_008942 |
Strand | + |
Start bp | 933188 |
End bp | 934750 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 640099601 |
Product | excinuclease ABC subunit C |
Protein accession | YP_001030374 |
Protein GI | 124485758 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0694942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCCCCT TCGATCTTGC CGACATTCCC CATTCGCCGG GCTGCTATTT ATACAAAAAC AGCGAAGGGA CGATTATCTA CGTCGGCAAA GCAAAAGATC TGCGAAAACG CGTCTCTTCC TATTTTCAGA AAAAGGATCA CGATCCAAAG ACCCAAAAAC TGGTGGCAGC GATCCGTTCG GTCGAGTATA TTATCACGGC GACCGATGAA GAGGCATATC TTCTGGAAAA TACGCTCATA AAACATCACC TCCCGAAGTA CAACATCGAC CTCAAGGATG CAAAATCCTA CGCGTACATC GAACTCACGA AAGAGCCGTA TCCGCGTATC ACCATTGCGA GAAACACACG CGGGAACGGG CAGTTTTTCG GGCCATTCGT CTCGGCAAAG GAGCGGGACT ATGTGCTTTC GGTCGTGAAA AAAACCTTCA GACTCAGGTC CTGTAAAAAT ATGCCGAAGA ACCGTCCGTG CCTTCGATAT CATATAGGAA ACTGCACAGG GCCCTGCGGG GCACACGTCT CCGTCGATGA ATACGCAAAA CAGTGTTCAT ACGCTGCAGA AGTGCTGAAA GGGAGCACAA AAGAGATCAC TGCCAAACTC GAAGAGGAGA TGGCTGAGTA TTCAAAGGAC ATGGAGTTCG AGGCGGCCCT TCTCTGCCGG GACATGATCA CCGCGGTCGA AAATCTCTCT TCGCGTCAGT ATGTTGCCAG AAAAACCGAT CATGACGAGG ATGTCATCGC CTACCGTGTT GTTGACGGAA CGGTGTATCT GATGGTTTTC CATGTCTACA AAGGAACGCT CGGCGGCAGG GACGAGTTCA TTTTCGATGC CTCCGACGGA TTTTTCGAAG AGTTCGTCGC CAGATATTAC ACCGATGAAA ATCCGGCTCC AAAAGAAATA ATCGTCGAGG AGGAGCTGGA CGAAGCACTC GCCGCGTATC TTGGAACTCT TGCAGGACAT GTTGTCAAAA TCACCGTCCC GAAACAGGGA GCCAAGAAGA AACTGCTCGA ACTTGCGGGA AAAAATATCG AGACGGTACA CTTCGGTGAT GAAATAAAGG TCATGGAGCT GCAGGCGGCC CTTCATCTCA AGACCCCGCC GAACGTGATC GAGTGTTTCG ATATCTCGCA CCTTTCAGGG ACCGATACGG TCGCCTCCAT GGTCCAGTTT AGAGCCGGCA GACCGGATAA GAGAAACTAC CGGCGGTTCA AAATCAAAAC GGTCGACGGG ATCGACGACT TCGCTTCGAT GGCCGAGGTC GTCCACCGCA GATACAGCCG CCTGATCGAA GAGGAAAAAC CTCTGCCCGA TCTTATCGTG ATCGACGGAG GGAAAGGGCA GCTCTCGTCA GCCAAGCGGA TCATTGATGA ACTGGATGCC GACATCCCGC TCATCTCGCT TGCGAAAGCG GAAGAAGAAG TATTCGTATC GGGAGTACCT TTCCCGCTGC CGTTCGGCAA AAAAACGAAG GCAAACATGT ACCTTCAGGA GATACGGGAC GAGGCCCACA GATTTGCTGT TACGTATAAC CGGCTGCTTC GGAAAAAGCG GCTGGTAAAA TAA
|
Protein sequence | MPPFDLADIP HSPGCYLYKN SEGTIIYVGK AKDLRKRVSS YFQKKDHDPK TQKLVAAIRS VEYIITATDE EAYLLENTLI KHHLPKYNID LKDAKSYAYI ELTKEPYPRI TIARNTRGNG QFFGPFVSAK ERDYVLSVVK KTFRLRSCKN MPKNRPCLRY HIGNCTGPCG AHVSVDEYAK QCSYAAEVLK GSTKEITAKL EEEMAEYSKD MEFEAALLCR DMITAVENLS SRQYVARKTD HDEDVIAYRV VDGTVYLMVF HVYKGTLGGR DEFIFDASDG FFEEFVARYY TDENPAPKEI IVEEELDEAL AAYLGTLAGH VVKITVPKQG AKKKLLELAG KNIETVHFGD EIKVMELQAA LHLKTPPNVI ECFDISHLSG TDTVASMVQF RAGRPDKRNY RRFKIKTVDG IDDFASMAEV VHRRYSRLIE EEKPLPDLIV IDGGKGQLSS AKRIIDELDA DIPLISLAKA EEEVFVSGVP FPLPFGKKTK ANMYLQEIRD EAHRFAVTYN RLLRKKRLVK
|
| |