| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0867 |
|---|
| Symbol | |
|---|
| ID | 4795793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 857885 |
|---|
| End bp | 859174 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640099531 |
|---|
| Product | proteasome-activating nucleotidase |
|---|
| Protein accession | YP_001030305 |
|---|
| Protein GI | 124485689 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
|---|
| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.199281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0151046 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGAAG AAATACCATC ACCCAATACC GGTCGCTCAC GCGAATCGAA CATCTCCCCC
AACGCCCTCG ACTTCGGGGA CCTCAACGAC CAATACGCCA AGTTACGGGA CGAAGCTCTT
TTCCTGAAAA AAGAGAACGA CTCTCTCCAT AAAATAATCA AAACGACAAA AACCGAAAAC
GAGTCCCTCA GGCTGGAGAA CAACAAGATC CGGATGGACA ATGCGCAGCT CAAGAAGGAG
AATGCGCAGC TCAAACGCCT GCCGCTGTTT GTCGCGGTTG TTTTGGAGAA GCTCGGCGAG
AATGAGCTTT ATCTGCGCCA GCTCGGCAAC AATCAGGAGT ATGTGACCCA GGCGAACCCG
CTGATCTACG CAGAGGTCAA GGCAGGGACC AAAGTTGCCG TCAACAACAC TCTCTCGGTC
GTGAAGATCC TTGGAAACAC CATCGACGAG CGGGTCCGCG TGATGGAGCT TGAAGAGAAG
CCCGCGATCA CCTTCGCCGA CATCGGCGGT CTGAAAAACG AGATCATCGA GGTGCGTGAG
GCGGTCGAAT ATCCGCTTAC CCGTCCCGAG TCCTTCGAGA AGTTTGGTGT CGTCCCGCCC
AAAGGCGTCC TCCTCTACGG CCCGCCCGGA ACCGGCAAGA CGCTGATCGC AAAAGCGGTC
GCCAATAATG CCGGCGTTCC GTTCCTGAGA ATGGCAGGTT CCGAGCTTGT CCACAAATAC
ATCGGTGAAG GCGCCCAGCT GGTTCGCGAT CTCTTCGAGA TGGCCCGTGA TCTTGCCGAG
AAAAACAACG GGGTCGTTGT CTTCATCGAC GAGATCGACG CGGTCGGCAG TATGCGGACC
AACGACGGAA CGTCCGGTTC TGCTGAGGTT CAGAGAACCT TAATGCAGCT TCTCGCCGAG
ATGGACGGGT TCAACAACCG CGGCAATATC CGGATCATGG CGGCGACAAA CCGCCCTGAT
ATGCTGGATG CAGCCCTCCT CCGTCCGGGA AGATTCGACC GGCTGATCAA GATCCCGGCC
CCCGACAATG CTGCACGGAT GCAGATCTTT AAGGTCCACA TGAAGAAGAT GGAAGCAGCC
GGCTCCCTTT CCGGCATCGA TTACGACGAA CTGGTGCGTA TGACCGAAGG TCTGACCGGC
GCCGAGATCG AAGCGATCTG CCGCGAGGCG GGAATGCTTG CCATCAGAAA CAACGAAGAT
CTTATCACCG GCATGAACTT CGTCCAGGCG ATCCGCAAGG TCAAGCACCA GGACAAGGAT
GAAGAGCGCC GGGACATAAT GTATATCTAA
|
|---|
| Protein sequence | MEEEIPSPNT GRSRESNISP NALDFGDLND QYAKLRDEAL FLKKENDSLH KIIKTTKTEN
ESLRLENNKI RMDNAQLKKE NAQLKRLPLF VAVVLEKLGE NELYLRQLGN NQEYVTQANP
LIYAEVKAGT KVAVNNTLSV VKILGNTIDE RVRVMELEEK PAITFADIGG LKNEIIEVRE
AVEYPLTRPE SFEKFGVVPP KGVLLYGPPG TGKTLIAKAV ANNAGVPFLR MAGSELVHKY
IGEGAQLVRD LFEMARDLAE KNNGVVVFID EIDAVGSMRT NDGTSGSAEV QRTLMQLLAE
MDGFNNRGNI RIMAATNRPD MLDAALLRPG RFDRLIKIPA PDNAARMQIF KVHMKKMEAA
GSLSGIDYDE LVRMTEGLTG AEIEAICREA GMLAIRNNED LITGMNFVQA IRKVKHQDKD
EERRDIMYI
|
|---|
| |