| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0858 |
|---|
| Symbol | |
|---|
| ID | 4794591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | + |
|---|
| Start bp | 844929 |
|---|
| End bp | 846341 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640099521 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001030296 |
|---|
| Protein GI | 124485680 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.392282 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.20959 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGG TCATCACCGA TCCGCTGCGC CAGAAATTGC TTTTATTAGC TGTCGGCATT
GCGGTTTTCG TGGACGCTCT CGACGGCTCG GTCGTAAATA TCGCTCTTCC GGTGATCGCG
GCGGAATTCG GGGCGGACAC CGGAACGATC TCCTGGGTGA GTCTGGCGTA CCTTCTGACG
CTTGCGGGTC TCATCCTGAT CTTCGGCAAA CTTGCCGACC GCGGATATGT AAAAATCCTC
TTCATCGCAG GCTTTGTTCT CTTTACGCTC TGCTCGATCG TCTGCGGCTT ATCACCCGAT
CTTTCGTTTC TGATAGTCGC CCGGATCTTC CAGGGGGTAG GCGCCGCGAT GATCGCCGCG
TCCACGCCGA TGATCTGCGT GAAGTATCTC CCGGCAAATA TGCTCGGCGT CTCGATGGGG
GTTTTGACCG CGGCGAGTTC CATCGGGTTT GCGGTTGGTC CGGCGATCGG CGGCGTGATC
ACCCAGTTCC TTTCCTGGCA CTGGATCTTT TTCATCAATA TTCCGATCGG GATCTTCGCC
GTTTTGTTTG CGGTGAAAAT CATCCCGCGT GCCCGTGTCC CGGAGCGTTC CTCCTTCGAT
TTCGCCGGAG CGGCCGCTCT CTTCTGTCTG ATGGTCGCAG GCGTTTTCGC GCTGGAGCGT
TTTCCCCATC TGGGCATCTC CGATCCGCTG ATCATCGCGT CGGTCTGCGT ATGCGTTGTT
TCGCTGATCA TTTTCTGTGC AGCCGAGCTG AGAAGCAGTC ACCCGGTCCT GAACATCCGC
GTGTTCAAAA AGCGGCCGCT GACGTTTGTC GTGACGGCGT TTCTCGTCAG CCAGATCACC
AGTGCCGGCT TTTTCTATCT GCTGCCGTTC TATCTTTCGG CAGGGATGAA CTTTGATTCG
GCAACAAGCG GGCTGGTGCT TTTTATCCCG CCTGCGATCA CCGCAGCGCT GAGTATCCCG
CTCGGTCACT GGTCGGATGT TACCGAACGG CGCATCTTCG CGGTCGCCGC GTTCGGTGTT
CTCGCCGTGA CCAGTTTGAT CTACGCGTTC ATCGTTCCCG CATGGGGTCT GATCCCGCTT
GCGGGAAGTC TTGTTCTCAT GGGTCTTGTC TGGGGTATCG GCGGCGGACC TGCGTCCAGC
CGGGTCGTTG AACAGATGCC GAAAGGGGAA GAAGGGACCG GCTCTTCGCT GATGATGACG
ACGATGTACT TCGGCTGCGT TGTCGGGATC GCGCTATATG CTGCGGTATT CACCGCGGCA
ACGTCAACTG CCGGCGGGAT CGTTTCATTT GCCGATCTGG ATTACGCGAC GTTTATGTAC
GGATTCCATA TCACAAACGC GGTCGGTTTT TTCGTCGCCG CCGCGGCGCT GATCCTCTCG
GCCGTCGTAA AAGATCCGCC GCGGGCCAAA TAG
|
|---|
| Protein sequence | MTEVITDPLR QKLLLLAVGI AVFVDALDGS VVNIALPVIA AEFGADTGTI SWVSLAYLLT
LAGLILIFGK LADRGYVKIL FIAGFVLFTL CSIVCGLSPD LSFLIVARIF QGVGAAMIAA
STPMICVKYL PANMLGVSMG VLTAASSIGF AVGPAIGGVI TQFLSWHWIF FINIPIGIFA
VLFAVKIIPR ARVPERSSFD FAGAAALFCL MVAGVFALER FPHLGISDPL IIASVCVCVV
SLIIFCAAEL RSSHPVLNIR VFKKRPLTFV VTAFLVSQIT SAGFFYLLPF YLSAGMNFDS
ATSGLVLFIP PAITAALSIP LGHWSDVTER RIFAVAAFGV LAVTSLIYAF IVPAWGLIPL
AGSLVLMGLV WGIGGGPASS RVVEQMPKGE EGTGSSLMMT TMYFGCVVGI ALYAAVFTAA
TSTAGGIVSF ADLDYATFMY GFHITNAVGF FVAAAALILS AVVKDPPRAK
|
|---|
| |