Gene Mlab_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0587 
Symbol 
ID4795291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp558651 
End bp559256 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content48% 
IMG OID640099245 
Producthypothetical protein 
Protein accessionYP_001030028 
Protein GI124485412 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1549] Queuine tRNA-ribosyltransferases, contain PUA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0839673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000680338 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCCCGC CTGAGGATCC AGAGGATCTG ACAGATCCGC CGTTTTATCT GCCGCAGTTC 
GAGGAGGCAT ATCAGTACAT CATTAATGAA TATTATATTG CTCCGCGGGA TATCGCGGTT
TTTATCCCTT GTGCGGTACG AAAACCCTAC AGTACGAGTC CGAGCCATAA ACTGTTTCAC
GCATTATTCA ACGAAGTATT TCCCGATAAG GCAAAGTATC ATGTGGTGAT TTTCGGGACA
TGCGGGACGG TTCCTGCCGA ACTTGAACTG ATGTATCCGT TCGCACATTA TCATTACATG
CTTGGAAACG TAAAAGATCA GAAGATCAAA GACGACTTTC TGAGAATCGA GACGGCACGT
CTCGCCGGTT ATCTGGAAAA AACAAAGGAT ACCTATACAC ACAGAATAGC CTACTGTATC
GGTCTGTTTC GAAAAGCGAT GGAGGCGGCC GTTCTGCAGA CCGGCATTCC CGTCGAGATC
TATCCGACAA ATCCCATGAT CGACAAACTC TATGATGCCG ACTGTCCGTT TCCGGAAGGA
AGCCTTTCCA TGCAGGAGTA TCTGAACGAG TTCAGAACTG CGCTCTGCGA GATGCGGGAT
CGATAG
 
Protein sequence
MRPPEDPEDL TDPPFYLPQF EEAYQYIINE YYIAPRDIAV FIPCAVRKPY STSPSHKLFH 
ALFNEVFPDK AKYHVVIFGT CGTVPAELEL MYPFAHYHYM LGNVKDQKIK DDFLRIETAR
LAGYLEKTKD TYTHRIAYCI GLFRKAMEAA VLQTGIPVEI YPTNPMIDKL YDADCPFPEG
SLSMQEYLNE FRTALCEMRD R