| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mlab_0420 |
|---|
| Symbol | |
|---|
| ID | 4794451 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanocorpusculum labreanum Z |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_008942 |
|---|
| Strand | - |
|---|
| Start bp | 400745 |
|---|
| End bp | 401698 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640099073 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001029863 |
|---|
| Protein GI | 124485247 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1041] Predicted DNA modification methylase |
|---|
| TIGRFAM ID | [TIGR01177] conserved hypothetical protein TIGR01177 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0587292 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCTGT TGTTTGAACT CTCCGGAGAG AACCAGCCTC TGGCAGTTGC CGAGATCTCC
TGTGCGGGTA ATGTGACCCG CACGGAAAAC GGCATTGCCA TAGCTGACGT AAATGATCCG
GAAAGAACGA CACGGCTCGC ACAGACGCAT GTAGTCATGC GTCTCCTTGG AGAATGCGAT
GCATCAAAGG AAGACCTTGA AAGGCTCCTT GACCATCTCG CGCTCACGGC CCCCGGCAGA
TTCTGCTGTC GGGTAAGAAA GATTCATCCT GTCACCGTCA ATGCATCCCA ACTGGAACTC
GAGCGCATGA TGGGACAAAA AATTCACGGG ACTGTTGACC TGAACACTCC CGATGTAGAA
TATCGTGCCG TCTTTACCAA CGGCAGATGC TTCTTTGGAG AAGTCCTGCA CACCATAGAC
CGCGGATCTT ACGCCTACCG AAACCCTCAG AGAAGAGCAT TTTTCCATCC AGGCGTCATG
ATGCCCCTTA TGGCACGAAC CATGGTCAAT CTGACCCATG TCGAGCCGGG AGAGAAATTG
TGCGACCCGT TCTGCGGAAC CGGAGGCATG CTCCTTGAAT GTGAAATGAT GGGGATTGAT
GCGGTCGGGA GCGACTACGA CCCCGAGATG CTTATCGGAT GCAAACAGAA TCTGCCGAAC
GGAGCCTGCA TCCGGGCCGA TGCAACAAAG ATGCCCTATC CAGACGAAGC GTTCGACGCG
ATCGCAACCG ACCTGCCGTA CGGTCAGTCA ACTACCATCG GAGCCGAAAG CATCGATACC
TTGTACACGG AATCACTTAA GGAAATCAGG CGTGTTCTGA AACAAGGGGG CAGGGCAGTC
ATCGTGACTC ATAAAGACAT CAGACCTCTG GCAAAAGATC TCTTTGAAAT CGTTGGTTAC
TACGAACAGA GGGTGCATAA AAGTCTCACG CGAAGGATAC TCGTCCTCGC ATAA
|
|---|
| Protein sequence | MNLLFELSGE NQPLAVAEIS CAGNVTRTEN GIAIADVNDP ERTTRLAQTH VVMRLLGECD
ASKEDLERLL DHLALTAPGR FCCRVRKIHP VTVNASQLEL ERMMGQKIHG TVDLNTPDVE
YRAVFTNGRC FFGEVLHTID RGSYAYRNPQ RRAFFHPGVM MPLMARTMVN LTHVEPGEKL
CDPFCGTGGM LLECEMMGID AVGSDYDPEM LIGCKQNLPN GACIRADATK MPYPDEAFDA
IATDLPYGQS TTIGAESIDT LYTESLKEIR RVLKQGGRAV IVTHKDIRPL AKDLFEIVGY
YEQRVHKSLT RRILVLA
|
|---|
| |