Gene Mlab_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0253 
Symbol 
ID4795522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp237353 
End bp238216 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content48% 
IMG OID640098899 
Producthypothetical protein 
Protein accessionYP_001029696 
Protein GI124485080 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.153051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAGC GTTTATCCGA GCTTCTCGAA AAATCCCGAC CTGTTGCGGC CCATTTCAGC 
AGACCCCAAG GTGTGTCAGG TTCGTTCCTT TCCCAAAGAG CAGGGGTCGG TACGGAGTTT
GTCGATCTGC GTGAGTATCA GTGCGGCGAT GATGTACGTG CCCTCGATAA AAATGTCACT
GCACGGACCG GAATTCCGCA CATCCGAATT CACGCTGAAG AACCGGATCT GACCCTGTAT
GTCGGTGTTG ATTTGTCAGC ATCCGAACAT TTCGGTTCGG ATATGAGTAA ATGCATGACG
GCAAAAATTG CTGCAGCATC AATTCTTCTC TCAGCGGAAA ATGCCCATAT TCCTCTTGGA
CTCTTCCTCT TTACCTCCTC TGTGGAAACG TTCATCCAGG CCAAACGTGG TTCAGCTCAC
CTGTATCTTC TTCTCACTAC TCTTGCAGAA GCCGATGGAC AAAATACCCG GACCGATATC
CAGTCCGTCT GCTGTGACCT GGCATCCAGA ATAGCCAAAT CCTCTTCCAT CGTTTTCATA
TCAGATTTTC AGGATAATAA TTTCTCAGCA GGAATTCGGC TTCTTGCAGA GAGGCATCGT
CTATCTGCCA TTCGTGTTTC CGATTCCCGA GAATACGTTC TGCCCGATGT CGGTAGAATC
ATTCTCGAAG ATCCTGAATC AGGCAGACAA TATCTGGTCA ATACTTCGGA TCCTGATGTT
CGCAGAGGTT TTTCTGCCGC TGCAAAAGAT GCTGAGAATA CCTGTAATGG TATTTTTCAT
TCTTCCGGGG CTCAGATTAT CCCCCTGAAA ACTGACGGAT CAGTTGTCAA GACGCTTCAG
CAGGTATTTT TCAGAGGTGT ATAA
 
Protein sequence
MNQRLSELLE KSRPVAAHFS RPQGVSGSFL SQRAGVGTEF VDLREYQCGD DVRALDKNVT 
ARTGIPHIRI HAEEPDLTLY VGVDLSASEH FGSDMSKCMT AKIAAASILL SAENAHIPLG
LFLFTSSVET FIQAKRGSAH LYLLLTTLAE ADGQNTRTDI QSVCCDLASR IAKSSSIVFI
SDFQDNNFSA GIRLLAERHR LSAIRVSDSR EYVLPDVGRI ILEDPESGRQ YLVNTSDPDV
RRGFSAAAKD AENTCNGIFH SSGAQIIPLK TDGSVVKTLQ QVFFRGV