Gene Mlab_0104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMlab_0104 
Symbol 
ID4795849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanocorpusculum labreanum Z 
KingdomArchaea 
Replicon accessionNC_008942 
Strand
Start bp96124 
End bp97563 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content50% 
IMG OID640098750 
Productpreprotein translocase subunit SecY 
Protein accessionYP_001029548 
Protein GI124484932 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0201] Preprotein translocase subunit SecY 
TIGRFAM ID[TIGR00967] preprotein translocase, SecY subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGAAC TGTTGGATCG AATGGAACCC CTGCTGGCTA GAATGCCGGC AGTCAAGCCA 
CCGGAAGGTC ACGTCCACTT CAAAAACAAA CTGATGTGGA CAGCTGCGGT GTTGCTGCTG
TATTTTATTT TAACGAACAT TCCGGTGTTT GGTCTTTCCG CCACATCAAT CGATGTTTTT
GAGTATTACC GTGCCCTTTT AGCCGGTGCA CAAGGTACTA TCCTGCATCT TGGTATTGGA
CCGATCGTTA CCGCATCAAT CGTTTTGCAG TTACTCCGCG GTGCTGATCT GATTAAAATC
AACACGTCAG ATCAGCGTGG TCAGGTACTC TACATGGGTC TGCAGAAGGT CCTTATCTTC
GTCATGATCA TCCTTGAAGC TCTGCCGAAC GTGCTGGGTG GATGGATGAG TGCTGATCCA
GCCGTTTCGG CATTCTTCGG TGGGAACGCC GGTTTTGTCA TGCTGCTGAT CTTCCTGCAG
ATCTGTATTG GGGGTGTCCT TGTCATGTTT ATGGATGAGG TCGTCTCCAA ATGGGGTATT
GGATCCGGTG TCGGTCTTTT TATCGTCGCA GGAGTCGCCC AGGGTCTTAT TAACGGATTC
TTCAACTGGG AAGCAACGAC CGATCAGTTC GCGGTCGGAT TTTTCCCGAG ACTGTTCCAG
GTCATTGCCG ATGGTTCAAA CTTTATCGAA TACTTTGGTC TTCAGCTCCT GGCTCTCGTA
ACAACCGTTG GACTGTTCTT CATTATCGTG TATGTTGAAT CAACCCGTAT TGAGATCCCC
CTTGCTCATG CAAATGTTCG CGGTGCAAGG TCAAGGTTCC CGGTAAAACT TGTTTATGCT
AGTGTTCTGC CGATGATTCT TGTCCGTGTG CTGCAGGCAA ACGTCCAGAT GATTGGTATG
TTCCTTTCGA GCATAGGATT CACCGCACTC GGCGAGTATA ACGGCTCAAC GCCGATTAAC
GGTCTGATGT GGTACCTCGC TCCGATCAAC CAGCCTCAGG ACTGGATGTG GTGGCTTTCC
TCCTTCACCG GAACAGGTCA TGCCGTATGG GAAGTTATTC TCCGTGTCGG TATTGATTGT
ACGGTGATGA TTCTTGGTGG CGCCCTCTTT GCAATATTCT GGGTCAAGAC AGCAGGTCTT
GATTCGAAGC ATGTCGCCCG GCAGATTCAG AACTCCGGTA TGCAGATCCC CGGCTACCGG
AGATCTCCCG CCGTTCTTGA ACGCTATCTC GACAGATACA TTCCCCGTGT AACTGTTATT
GGAGGAGTGT TCATCGGTCT TCTGTCTGTT ATGGCAAATA TGCTTGGTAT CATCGGTTTT
GTTGGTGGAA CCGGTCTGCT GCTTACCGTC TCGATCATTT ACCGTCTGTA TGAACAGATC
GCAAATGAGC AGATGATGGA GATGTATCCG TTTATGCGGG GCTTCTTCGA CAAGGAATAA
 
Protein sequence
MGELLDRMEP LLARMPAVKP PEGHVHFKNK LMWTAAVLLL YFILTNIPVF GLSATSIDVF 
EYYRALLAGA QGTILHLGIG PIVTASIVLQ LLRGADLIKI NTSDQRGQVL YMGLQKVLIF
VMIILEALPN VLGGWMSADP AVSAFFGGNA GFVMLLIFLQ ICIGGVLVMF MDEVVSKWGI
GSGVGLFIVA GVAQGLINGF FNWEATTDQF AVGFFPRLFQ VIADGSNFIE YFGLQLLALV
TTVGLFFIIV YVESTRIEIP LAHANVRGAR SRFPVKLVYA SVLPMILVRV LQANVQMIGM
FLSSIGFTAL GEYNGSTPIN GLMWYLAPIN QPQDWMWWLS SFTGTGHAVW EVILRVGIDC
TVMILGGALF AIFWVKTAGL DSKHVARQIQ NSGMQIPGYR RSPAVLERYL DRYIPRVTVI
GGVFIGLLSV MANMLGIIGF VGGTGLLLTV SIIYRLYEQI ANEQMMEMYP FMRGFFDKE