| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5544 |
|---|
| Symbol | |
|---|
| ID | 4610346 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008703 |
|---|
| Strand | + |
|---|
| Start bp | 53136 |
|---|
| End bp | 55034 |
|---|
| Gene Length | 1899 bp |
|---|
| Protein Length | 632 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639789209 |
|---|
| Product | MmpL family membrane protein |
|---|
| Protein accession | YP_935544 |
|---|
| Protein GI | 119854939 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0167345 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGTACC GATACCGATT CTTCGTGGTC GTTGCGATGA CCGCAGCATG CCTGGGCGCC
GGAGTCTTCG GTATCAGCCT GGGCGAACAC GTCACACAGT CCGGGTTCTT CGACGACGGC
AGCGAATCGG CGCAAGCCTC CCGCCTTGCA GACACCGCCT ACGGACGCGA TACCTCTGGT
CACATCATCG CGATTTACAC CGCACCCGAG GGCACAACAG TCGACGACCC AGCCGTACGC
GACCACGTGA ACCATAGTCT GGACACCGCG ATACAAAAGC ATCCTGACGA AATCCTGCGC
GCAGTAGGGT ACTTCACCAA TCCGGAGATT CTGTCAACGA TGGCCGACGC ATCTCGACAG
CATGCGTTCA TGTCCATTCA GCTCCGAGGC GACGATGACG ACACCATCCT CAACAACTAC
AAGAAGGTCG CAAACTCCCT CGGTGTCGAC GGCGGCGTCG AGGTCCAACT CGCCGGTCTC
CAACCACTGG CCAACGAGCT GACCTCCACA ATCGGCACCG ACCAGAAACG CATGGAATTG
TTGGCCCTAC CGCTGGTCGC CATCGTGCTG TTCTTCGTGT TCGGCGGGGT CGTCGCCGCC
ACCCTGCCCG TCCTGGTCGG CGGCCTGTCC ATCGCCGGAG CGCTCGGCAT CATGCGCCTG
ATCTCAGAGA TCACACCGGT ACACGCTTTG GCGCAACCCG TCGTATCGCT GATCGGGCTG
GGCATCGCCA TCGACTACGG TCTCTTCGTC GTCAGCCGCT TCCGCGAGGA ACTCGCCGAA
GGCTACGACA CACCCACCGC GGTACGGCGG ACCGTGACCA CCGCAGGGCG CACCGTGATG
TTCTCCGCGA TCCTGATCGT TGCATCGTCG GCCGGCGTCC TGCTGTTCCC GCAAGGCTTC
CTCAAAGCGC TGACGTACGC GATCATCGCC TCGGTGATGC TCGCCGCCGT TCTATCGATC
ACGGTGCTAC CCGCCATCCT CGGCATCCTC GGACGAAACG TCGACGCACT CGGAGTACGC
ACCCTGCTGC GCATACCTTT TGTGCGAAAC ACAGTATGGC TCAACGGGAT CGCGCTGTGG
TTCGCCGACA GAACGCAGCG CACCAAGACT CGCCGCGAAG TCGAGAACGG ATTCTGGGGC
CGGCTGGTCA CCCGCGTCAT GAAACGACCC CTGATCTACG CAATCCCGAT CATCGTCGGC
ATGGTGCTGC TCATCCTGCC CCTCGGCAAG ATAACACTGG GCGGCATCAG CGAAAAATAC
CTGCCGCCCA CGAACTCTGT CCGCCAAGCC CAAGAGCAGT TCGACAAGAC TTTCCCGGGA
TTCCGCACCG AACCGCTCAC ACTGGTCATC ACACACAACG ACGGGCAACC CGTCACCGAC
GAACAGGTTG CCGACATCCG AAACCGGGCC ATGGCGATAC CGGGATTCAC CGTTCCTGAC
GCCGGGCCGG CCTCGATGTG GGCCGAGCGA TCTCGCCTGG ACGGCGCCAC CCAGCAACCA
GACGTGCGCG TCATTCAGAA CGGTCTCATC GACCGCAACA GCGCCGCAGG CCGGATCGAT
GCGCTGCGTG ACCTGCCATC TCCCGACGGG TTGACCATCC GGGTCGGCGG CACGCCCGCA
CTCGAACAGG ACAGCATCCA GGGGCTTTTC GACAAACTTC CCCTGATGCT CCTCGTGCTG
ATCACCACCA CCACGCTTCT GATGCTCCTG GCCTTCGGAT CGCTCGTGCT TACTGCTTAT
CCGCTTAAGT GGACCTGTGT CAGTCAGAAC TCGCCATATG TGTCGCTGGT GATGAATTCG
GTGGGATTGT CGTTGGGCGA GAACGGCTCT GAAGTGCGGC TGACTAGCTC GCTCAGTGGA
TGCGGGTCTG TATTGACGCT TTGCTGGAGC AGGCGGTAG
|
|---|
| Protein sequence | MVYRYRFFVV VAMTAACLGA GVFGISLGEH VTQSGFFDDG SESAQASRLA DTAYGRDTSG
HIIAIYTAPE GTTVDDPAVR DHVNHSLDTA IQKHPDEILR AVGYFTNPEI LSTMADASRQ
HAFMSIQLRG DDDDTILNNY KKVANSLGVD GGVEVQLAGL QPLANELTST IGTDQKRMEL
LALPLVAIVL FFVFGGVVAA TLPVLVGGLS IAGALGIMRL ISEITPVHAL AQPVVSLIGL
GIAIDYGLFV VSRFREELAE GYDTPTAVRR TVTTAGRTVM FSAILIVASS AGVLLFPQGF
LKALTYAIIA SVMLAAVLSI TVLPAILGIL GRNVDALGVR TLLRIPFVRN TVWLNGIALW
FADRTQRTKT RREVENGFWG RLVTRVMKRP LIYAIPIIVG MVLLILPLGK ITLGGISEKY
LPPTNSVRQA QEQFDKTFPG FRTEPLTLVI THNDGQPVTD EQVADIRNRA MAIPGFTVPD
AGPASMWAER SRLDGATQQP DVRVIQNGLI DRNSAAGRID ALRDLPSPDG LTIRVGGTPA
LEQDSIQGLF DKLPLMLLVL ITTTTLLMLL AFGSLVLTAY PLKWTCVSQN SPYVSLVMNS
VGLSLGENGS EVRLTSSLSG CGSVLTLCWS RR
|
|---|
| |