| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mkms_5259 |
|---|
| Symbol | |
|---|
| ID | 4612942 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. KMS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008705 |
|---|
| Strand | + |
|---|
| Start bp | 5495765 |
|---|
| End bp | 5496352 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639794956 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_941238 |
|---|
| Protein GI | 119871286 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.532008 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGACTC CGCGCAGTCG CCGCTCGGAC GCGTTCGCCA ACGTCCACCG CATCGTCGCC
GCCGCCCGCG AGGTGTTCGG CCGCGACGGC GTCAACGCGA CGCTGAGCCA GGTGGCCGAA
GCCGCCGGCG TCGCCAACGC CACGCTCTAC CGTCACTTCC CGAACCGTCG CGCCCTGGCC
GCCGCCGTCT ACGAGGACAT CGTCGTCACC GACATCAAAC CGGCGATCCT CGCACTGGGC
CGCGATGCCC CACGCGCAGC GTTCATCGAC GCCCTCGCCC ACCTCGAGGA CGTCATGTTC
CGCCAGCGTC CGCTGCTGAC CTCGATCGGT GACCTCGCCG ACCTCACCGC ACAGTTGTTC
ACGCGCGACC GCGAGCAGTT CGACGACATG ATCATGCAGG CGCAGGCGAC GGGTGCGCTG
CGGCCCGACC TCACCGCCGA CGACGTGGCG ACGTTCGTGG CGATGGTGAC CACCGCGTCG
GTCGCGATGA ACCAGCCACG GCCGGTGCGG CGCCGCTACC TCAGCCTGAT GTTCGATGCG
CTCAATCCCG CTGCGGCCGA GCCACTTACG ACACCCGACC ACCGCTGA
|
|---|
| Protein sequence | MVTPRSRRSD AFANVHRIVA AAREVFGRDG VNATLSQVAE AAGVANATLY RHFPNRRALA
AAVYEDIVVT DIKPAILALG RDAPRAAFID ALAHLEDVMF RQRPLLTSIG DLADLTAQLF
TRDREQFDDM IMQAQATGAL RPDLTADDVA TFVAMVTTAS VAMNQPRPVR RRYLSLMFDA
LNPAAAEPLT TPDHR
|
|---|
| |