Gene Mkms_4447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMkms_4447 
Symbol 
ID4612390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. KMS 
KingdomBacteria 
Replicon accessionNC_008705 
Strand
Start bp4680992 
End bp4681939 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content63% 
IMG OID639794133 
ProductDNA end-binding protein Ku 
Protein accessionYP_940428 
Protein GI119870476 
COG category[S] Function unknown 
COG ID[COG1273] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02772] Ku protein, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.28682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0562745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATCCA TCTGGAAGGG TTCGATCGCC TTCGGCCTGG TGAACGTACC GGTCAAGGTC 
TACAGCGCGA CCGAGGACCA TGACATCAAG TTCCACCAGG TCCACGCGAA GGACAACGGC
CGGATCCGCT ACAAGCGGAC CTGCGAGGTC TGCGGTGAAG TGGTCGAGTA CCGCGACATC
GCCAAGGCCT TCGAATCCGA CGACGGTCAG ATGGTCGTCA TCACCGACGA GGACATCGCC
ACGCTGCCGG AGGAACGCAG CCGGGAGATC GAGGTACTGG AGTTCGTCCC GGCCAGCGAC
CTCGACCCGC TGATGTACGA CCGCAGCTAC TTCCTCGAGC CCGACGGAAA GTCGTCGAAA
TCCTATGTGC TGCTTGCCAA GACGCTGTCG GAGACCGATC GTGTCGCGAT CGTGCACTTC
GCGTTGCGCA ACAAGACGCG GTTGGCCGCC CTGCGCGTCA AGGACTTCTC CAAACGTGAC
GTGATGATGA TCCACACGCT GCTGTGGCCC GACGAGATCC GCGATCCCGA TTTCCCCGTG
CTGGACAAGG AAGTCGAGAT CAAACCCGCC GAGTTGAAGA TGGCCGGTCA GGTGGTCGAA
TCGATGACCG ACGACTTCAA CCCGGACCGG TATCACGACG ACTACCAGGA TCAGCTGCGG
GAGTTGGTGG AGGCCAAGCT CGAAGGCGGT GAGGCGTTCG CCGTCGAGGA ACAGCCGACC
GAACTCGACG AGACCGAGGA CGTGTCCGAC CTGCTGGCGA AGCTGGAGGC CAGCGTGAAG
GCGCGGCGCT CGGGTTCGAG CTCCGGCAGT GACTCCGACG ACGGCGACGA ACCGGCGAAG
AAGGCCCCGG CCAAGAAGTC GGCGGCCGAG AAGGCTCCCG CCAAGAAGGC CGCGAAAAAG
ACCGCTGCCA AGAAGGCGCC GGCCAAGAAG GCTTCCGCCA AGAAATAG
 
Protein sequence
MRSIWKGSIA FGLVNVPVKV YSATEDHDIK FHQVHAKDNG RIRYKRTCEV CGEVVEYRDI 
AKAFESDDGQ MVVITDEDIA TLPEERSREI EVLEFVPASD LDPLMYDRSY FLEPDGKSSK
SYVLLAKTLS ETDRVAIVHF ALRNKTRLAA LRVKDFSKRD VMMIHTLLWP DEIRDPDFPV
LDKEVEIKPA ELKMAGQVVE SMTDDFNPDR YHDDYQDQLR ELVEAKLEGG EAFAVEEQPT
ELDETEDVSD LLAKLEASVK ARRSGSSSGS DSDDGDEPAK KAPAKKSAAE KAPAKKAAKK
TAAKKAPAKK ASAKK