| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_5453 |
|---|
| Symbol | |
|---|
| ID | 4881150 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 5715730 |
|---|
| End bp | 5716854 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640142770 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_001073707 |
|---|
| Protein GI | 126438016 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGGTG TCGACGATCG GCTGCTCGCC GCAGCTTTGC GGCCAGCCCC AGCCCGGCTC
ACGGCCGACT CCTTCGACAC CTGGCGCAGG GATGTGCGCC GCGCGGCGAT CGATGCGGTG
ACCGAGTTCG TCACCGACCG GTGCGCCGAC GACCTGCGGC TCACCGGTGT CGACGTCACC
CTCGATGTGC TCTCCGACTT CGTCGGCGAC GGTAAGTGCC TGCGTTCGAC GTTCGCCTAC
CTCGGCTGGC TGGCCGGTGC CGCACCCGAC GACGCCGCCC TGCGCGCCGC AGCGAGTTTC
GACCTGCTGC ACGTGTTCGC GCTGCTGCAG GACGACGTGA TGGACGATTC ACCGCTGCGC
CGGGGCCGTC CGGCGGCGCA TGTGCGCTTC GCGCAGTGGC ACCGGGACAA CGGACTCAAC
GGATCCGCGG AACGGTTCGG CGCCTCGGCG GCGGTGCTGC TCGGCGACCT CTGCCTGGTG
TGGGCGGGGC AGATGATGCG CGAGAGCGGT CTGGGTGACC GCGCACTGGC CCGGGCGTGG
CCCCGGTACG ACGCGATGCG CACGGAATTG GCGGTGGGCC AGTTCGCCGA TCTGGTCAAT
GACGCGGGCG GACGGCCGAC ACTGGAGGAC GTGCTCGACG TCGCACGCCG CAAATCCGGG
AACTACACGG TGCGCCGCCC CCTGGAGATC GGCGGTGCAC TGGCCGGCTG CCCCGAGGCG
ACGCTGGGGT TGCTCGGCCG CTACGGCGCG GCCGTCGGTG AGGCGTTCCA GCTGCGCGAC
GACCTCCTCG GCATCTTCGG TGCCCCGACG GTGACCGGTA AACCCGCAGG CGGCGACCTG
TCCGAACACA AGGCCACCAG CGTGGTGGTC GCGGCGCACC GGCTGGCCGA ACCGTCGGTG
CGCAACCAAC TCACCGAGTT GATGTCGCGA CGCGACCTCG ACGCCGGTGA CATCACCCGC
TGGCAGCACC TCATCGCCGC GACCGGCGCC GTGCAGTGGA TCGAGCAGCT GATCGACCGG
CGGCTCTCGC ACGCGCTGGA GCGCATCCAC ACCAGCCCAC TCGACGACAC CGTCAGAACC
GCACTGGTCA ACATGGCCGC CGTATGCACT CGGCGGGCAG CGTGA
|
|---|
| Protein sequence | MSGVDDRLLA AALRPAPARL TADSFDTWRR DVRRAAIDAV TEFVTDRCAD DLRLTGVDVT
LDVLSDFVGD GKCLRSTFAY LGWLAGAAPD DAALRAAASF DLLHVFALLQ DDVMDDSPLR
RGRPAAHVRF AQWHRDNGLN GSAERFGASA AVLLGDLCLV WAGQMMRESG LGDRALARAW
PRYDAMRTEL AVGQFADLVN DAGGRPTLED VLDVARRKSG NYTVRRPLEI GGALAGCPEA
TLGLLGRYGA AVGEAFQLRD DLLGIFGAPT VTGKPAGGDL SEHKATSVVV AAHRLAEPSV
RNQLTELMSR RDLDAGDITR WQHLIAATGA VQWIEQLIDR RLSHALERIH TSPLDDTVRT
ALVNMAAVCT RRAA
|
|---|
| |