| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_4113 |
|---|
| Symbol | |
|---|
| ID | 4879820 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 4346149 |
|---|
| End bp | 4346859 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640141423 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001072377 |
|---|
| Protein GI | 126436686 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.249212 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACA GAATAGGCCA CTGTGTCGGA CAGGGTCAAT ATCTGCAGGT AAGCTCTGCA
ACCGTGACCG CGCATTCGCA GGTGAGTCGG GCTGCCGCCT GGGGCGCGGA CCTGCCGCTC
AACGAGGAGC AAGCGCGAGA GCGCCTGCTG GCAGCGGCCG AAGCGTGCTA TGCGGAGCGC
GGACCGACCA GCACCCGGAT GAGTGACATC GCCAAGAAGG CGGGCGTCAA CCGATCCACG
GTGTACTACT ACTTCCCGAC CAAAGACGCG ATTCTCGTTG CCTCGTTCGT TCGTGCCCTT
GACGGCGTGC TCGCCGCCGC CGACCATTGC TGGCGTACAG ACGAGCCTTT CCTCGATCGT
CTGGTCGCGG CGTGTCTTGC CGGAAATGCC GCAGCCCGCA CATCGCCGGC CATCCGGCTA
CTCATTCACA ACGACGAAGC GGCGCACACT TACCACGCGG CCGAGCACTC AGAGCTATGG
CGTGACAAGC TCGCAGAAGC GCTCGGTCAG CGCATCGCCG GCGCTGCGGC GGCCGGGGAG
GTCCGCGATG ATCTCTCCCC GGACACGTTG GCCCGTTGGG TGACTCGAGT CAACTTCAGC
CTCATGTCGG AGCCCGCCGG CGCAGAAGAC GGCGGCGAGG AAGGAATACT CCGCAATCTG
CTCGCGGCAT CGCTCGCCCC GCGGACATCG GCCGGGACGT CACGGAGCTA G
|
|---|
| Protein sequence | MSDRIGHCVG QGQYLQVSSA TVTAHSQVSR AAAWGADLPL NEEQARERLL AAAEACYAER
GPTSTRMSDI AKKAGVNRST VYYYFPTKDA ILVASFVRAL DGVLAAADHC WRTDEPFLDR
LVAACLAGNA AARTSPAIRL LIHNDEAAHT YHAAEHSELW RDKLAEALGQ RIAGAAAAGE
VRDDLSPDTL ARWVTRVNFS LMSEPAGAED GGEEGILRNL LAASLAPRTS AGTSRS
|
|---|
| |