| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_2587 |
|---|
| Symbol | |
|---|
| ID | 4878303 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 2712592 |
|---|
| End bp | 2713896 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640139884 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001070860 |
|---|
| Protein GI | 126435169 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.308714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAACA AGCGCAATGC AGCGAAGCGC ACTTCCGACA ACGGGTCCGT CGCAGGCAGC
TCATATGACG ACGGCACGCG CCGCACCGAG ATACTGCAGA CCGCGGCCCG CATGATCGCG
ACGTCAGGAT TGCGCACATC ACTGCAGGAG ATCGCCGACG CCGCCGGCAT TCTGCCCGGC
AGCCTCTATC ACCACTTCGA ATCCAAAGAG TCGATCCTCG TCGAACTACT GCGGCGTTAT
CACGCCGATC TCGACCGGAT CGCCGAACAC GCACAGGCCA CGCTGGACGA CCCGTCGTCA
CACTCCGCCT TCGACCGGGT TCTCGAGTTG AGCGTGGCGA TCGCGCAATG TGCCGTGACG
CACCGCGCCG CGCTGCAGAT GTCGTTCTAC GAGGGCCGCA GCTCCAACCC CGAACTGGCG
ACTTTGGCGC AGCGGCGACC GACCGCGGTA TTGCAGGCCA TGCTGCAGAC ACTGCGGGCA
GCCAGATGGA GCGGTTGCAT CAGGTCCGAC GTCGATCTTC CGGTGCTGGC CGACCGGATG
GTGCAGACGA TGCTGCAGGC GGGTCTCGAC GTCATACGCC AGAACACGCC CGTCGAAAAG
GTGGCCACTC TGCTGACCCG AATCGAGCTC GAGGGCCTGG CAGCCGAGCC TCCGACTGAT
CAGATGCTCG ACCAGTCGGC CGCGTTCTCG GCCGCCGACG CCGTCGTGCA GTCTTGGAAC
GACAACGAGA CCGAGGCCGA CGACAAGGCG GCACACGTGC GCGCAGTCGC CCGGACGGAA
TTCGGGCGTC GGGGTTATGA AGTCACCACC ATCCGGGACA TCGCTTCGGC AGCCGGCATG
GGTACCGGCA CGGTGTACCG GCTGATCGGT TCCAAGGACG AGTTGCTCGT GTCGATCATG
CGGTCCTTCG GAGAGAAGGT GGCCATGGGC TGGACCGAGG TGCTCAGTGC CGACGCGACA
ACGATCGAGA AGCTGGACGC GTTGAGCTGG ATCAACACCA ACGCGCTGGA CCGCTTCGGC
GACGAGTTTC GGATTCAGCT GGCCTGGATG AGGCAGTCGC CTCCCGGTAC GCCGAACCCC
GGGTGGTTGT TCTCAAAACG TGTGCGACAG ATGAGAAGTC TGCTGGCCGA GGGCATCCGA
TCCGGCGAGG TGCGCGTCGA CAGCCCGCCG AACGATCTGT TGGCGCGCGG CGTCATCGGA
ATCGGCTGGA TCCCGGAGAA CATCCTGCGC GACCTCGGAA CGCGCCGGGC ACTGATTCAC
GTCCGCGATA CGACACTTCG TGGCGTCGTC GAACGCAACG CCTGA
|
|---|
| Protein sequence | MTNKRNAAKR TSDNGSVAGS SYDDGTRRTE ILQTAARMIA TSGLRTSLQE IADAAGILPG
SLYHHFESKE SILVELLRRY HADLDRIAEH AQATLDDPSS HSAFDRVLEL SVAIAQCAVT
HRAALQMSFY EGRSSNPELA TLAQRRPTAV LQAMLQTLRA ARWSGCIRSD VDLPVLADRM
VQTMLQAGLD VIRQNTPVEK VATLLTRIEL EGLAAEPPTD QMLDQSAAFS AADAVVQSWN
DNETEADDKA AHVRAVARTE FGRRGYEVTT IRDIASAAGM GTGTVYRLIG SKDELLVSIM
RSFGEKVAMG WTEVLSADAT TIEKLDALSW INTNALDRFG DEFRIQLAWM RQSPPGTPNP
GWLFSKRVRQ MRSLLAEGIR SGEVRVDSPP NDLLARGVIG IGWIPENILR DLGTRRALIH
VRDTTLRGVV ERNA
|
|---|
| |