| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1954 |
|---|
| Symbol | |
|---|
| ID | 4877676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | - |
|---|
| Start bp | 2060121 |
|---|
| End bp | 2061278 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640139253 |
|---|
| Product | 6-aminohexanoate-dimer hydrolase |
|---|
| Protein accession | YP_001070233 |
|---|
| Protein GI | 126434542 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.792193 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTCC CGCCCGATCT GACCCTGGAC AACTGGCAGA CGGTCCCCCA TCTGCACTGG
GCGTTCCAGC ACCTCGCCGA ATTCCTGCCC ACCGCGCGGA TCTCCCGTGG CACCGGGCCG
GTCGCGGAGC TACCCGGCCG GGCCGCCGCG GTGTCGGACA TCGCGGTGCC GGGCGGCGCC
ACCACCGTCG GCGAAGTGCT GGATACGACC GCGACCGACG GGTGGATCGT CACCCGCAAC
GGCGAGATCC TCGAGGAGCG GTATCCGAGC GGCATGCTCG CCGACACCCC GCATCTGCTG
ATGTCGGTCA GCAAGACCCT CGTCGCCACC GTGGCGGGCG CGCTGGTCGG CCGGGGCGCG
CTGAGCCCCG ATGCGCAACT GACCCGCTAC GTCCCGGCGC TTGCGCGGTC CGGCTACGCC
GGCGCGACCG TACGCCACCT GCTCGACATG CGGTCGGGCA TCGCGTTCTC CGAGGAGTAC
CTCGACCCGC TCGCCGAGGT GCGGTTGCTC GAGCAGGCGA TCGGCTGGGC GCCGCGCACC
GTGGCCGACC TCCCCGACAC CATGTACGGC TTCCTGCTGA CGCTGCGCCA GAGAGGCCCA
CACGGCGGCC CGTTCGACTA CCGCTCGTGT GAGACCGACG TGCTGGGCTG GATCTGCGAG
GCCGCCGCGG GCACCCGCAT GCCGGCACTC ATGTCGGAGC TGCTGTGGAG TCGCATCGGC
GCGCAGACCG ATGCGGTCAT CGGCGTGGAC CGCGAAGGCA CCGGCATGTT CGACGGTGGC
ATCAACGCCT GCCTGCGCGA TCTGGTCCGG GTCGGCTCCC TGTTCCTCAA CGAGGGGGTG
TCGCTGACCG GCCACCAGGT CGTACCGGCG GCCTGGATCG CCGACACGCT GGCCGGCGGT
GCCGATTCGC GTGCGGCCTT CGCGGCGGGC CGCGACGCCG CCCGCTTCCC CGGCGGGATG
TACCGCAACA AGTGCTGGCT GCCGTACCCC GGCGACGATG TGCTGCTGTG CCTCGGCATC
CACGGGCAGA TGATCTACGT GAACCGGCCC GCGGGGGTGG TCGCCGCCAA ACTGTCGAGC
TGGGCGCTGC CCGAAGAGGA CGACAAGCTC ATGGCCACGA TCGCGGCGTT CGACGCCGTC
GCCACCTCTT TCAGGTGA
|
|---|
| Protein sequence | MSVPPDLTLD NWQTVPHLHW AFQHLAEFLP TARISRGTGP VAELPGRAAA VSDIAVPGGA
TTVGEVLDTT ATDGWIVTRN GEILEERYPS GMLADTPHLL MSVSKTLVAT VAGALVGRGA
LSPDAQLTRY VPALARSGYA GATVRHLLDM RSGIAFSEEY LDPLAEVRLL EQAIGWAPRT
VADLPDTMYG FLLTLRQRGP HGGPFDYRSC ETDVLGWICE AAAGTRMPAL MSELLWSRIG
AQTDAVIGVD REGTGMFDGG INACLRDLVR VGSLFLNEGV SLTGHQVVPA AWIADTLAGG
ADSRAAFAAG RDAARFPGGM YRNKCWLPYP GDDVLLCLGI HGQMIYVNRP AGVVAAKLSS
WALPEEDDKL MATIAAFDAV ATSFR
|
|---|
| |