| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mjls_1470 |
|---|
| Symbol | |
|---|
| ID | 4877205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. JLS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009077 |
|---|
| Strand | + |
|---|
| Start bp | 1575650 |
|---|
| End bp | 1579075 |
|---|
| Gene Length | 3426 bp |
|---|
| Protein Length | 1141 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640138777 |
|---|
| Product | SARP family transcriptional regulator |
|---|
| Protein accession | YP_001069762 |
|---|
| Protein GI | 126434071 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGGGAC CGCTGCAGGT GACGCATGCG GACTGCCCGG TCGACATCGG GCCGCCGAAG
CAGCGCGCGG TGCTCGCCGT GCTCCTGCTC GCCGCGGGCC GGGTCGTATC GGTGGACCGG
CTGATCGACG CGGTCTGGGG TGACGATGCC CCGGGCAGCG CGACGGCCAG CCTGCAGGCC
TACATCTCCA ATCTGCGCCG GGCCCTGCGC GACGCGGGTC AGTCGCAGGT CGCCTCGCCG
ATCGTGCGGC AACCGCCGGG GTATTTCCTC AACGTCGAAC CCGGCCAGGT CGATCTGGCG
GTGTTCGCCT CCGGCTGCGC CAGGGCGGTG GCCGCCGTGG ACAGCGGGGA CTGGGACGCG
GCGCTGGCCG CCGCCGACGA GGCCCTGGCG TGGTGGCGTG GGCCGCTGCT GGCCGACCTG
TCCGACGAAC CGTGGGTGGC CGACGAGGCG GCCCGCGCCG AGCACCTGCG CGCCGATTGT
CTGGATGCGC GGATCACCGC GCTGCTGGGG CTGGGCCGGG TGCCGCAGGC GCTGGCGGCG
GCGGCCGAGT TGCGCTCCGC CACACCGCTG GCCGACCGCG GCTGCTGGCT GCACATGCTC
GCGCTGTACC GGGCGGGCCG GGTGACCGAC GCGCTGGACG TCTACACCCG CCACGCTCGG
CTGCTCGACG ACGAACTCGG CGTGCAGCCG GGACGCGAGG TCCGCGAGCT GCAGACCGCG
ATGCTGCGGC AGGCACCCGA GTTGGCGGCG TGGCCGCGGT CCCCGGAGTG GACGGGCGCC
GGTGCGGTGG CCACCCCGGC CGCGCCCACG GTCGAGCCGT CGGTGGTCCC GGCGGGCCCG
AGCCGGGGCG CGCTGATCGG CCGCAGCCGC GAATTGTCCA CCGCCGCAGG TGTGCTCTCG
GACGTCACGG CGGGTGCGGC GCGGTGGCTG GTGCTGTCGG GTCCGGCGGG AATCGGCAAG
ACCCGGCTGG CGGAGGAGGT CGCGGCCCGG GTGGTCGCCG ACGGCGGGGA CATGGTGTGG
GTGAGCTGTC CCGACGAGCG GGCGACCCCG CCGTGGTGGC CGATGCGGCA GCTGGTGCGG
GCGCTGGGCG CCGATCCCGA CGACGTGCTG GAGGTGCCGC CGGACGCCGA TCCGGACACC
GCGAGATTCC GTGTCTACGA ACGCATCCAG ACCCTGCTGG AGTCGGCGCC GCGCACGCTT
GCGGTGGTCA TCGACGACGT GCAGTGGGCG GACACCACGT CGGCGGCGTG CCTGGCCTAC
ATCGCCGGGG CGCTGCGCGA CCACGCGGTG GCGCTGATCC TGACCGTGCG CGACGGCGAA
CACAGCGCCG AGGTTTCCAG GCTGGTGACG ACCGTGGCCC GTGGCGACCG CAACCGCCAC
GTGGCGGTTC CGGCGTTGTC CACCGAAGAT GTTGCGGCGC TGGCGAATCA GGTCGCCGAC
GATCCGGTGA CCGAGGCGGA GGCGGCGCTG CTGGCCGACC GGACGGGCGG CAACCCGTTC
TTTGTCTCCG AGTACGCTCG GCTGCCCCGC GCCGACCGGG TCGGCAGCGA GATCCCGGTC
GCGGTGAAAT CGGTGCTGGA CCGCCGCCTG GCCGGGCTCG ACCCGGCCGC CGTGCAGGTG
CTGCGGACGG CCGCGATCAT CGGTGACACG CTCGATTCGG ACGCCGTGCC GGTGCTGGCC
CAGGCCACCG GAATGGACGT CGACACGCTG GCCGACCATC TCGACGATGC GGCCGACGAG
CGCATCGTGA TCGCCGCGCA CACCGGTGAC GGGTACGCGT TCGCGCACGG ACTCCTCCGT
GACCATCTCA TCGCGGGGAT CCCCCCGCTG CGCCGCCAAC GCCTGCACGC CAAGATCGCC
GACGTGCTCG ACGGCAGCAC CGCCGAGGGT GCGCTGACGC GCCGCGCCCA GCACCTCATC
GCCGCGCAGC CCCTGGTGGA CGCCGGCGCG GTGGTGCAGG CGTGCCGACT GGCCGCCGAG
GATGCCACGG CGCGGTGGAG TTCGGACATC GCGGCGGTGT GGTGGCAGGC CGCGCTGGAC
GCCTACGACC GCCTCCCGGC GGCGTCGCGC TCGGAAGAGG AGCGCGACGG GCTGACCGTG
GCAATGCTCG AGGCGCATTC GCGCGCCGGG CGCGGCCGGC TGGTCCTCGA CACCGTCGCC
GCACAACTCG GTGATGCCGT GCGCACCGGT CGGGCCGCGA CGGCCGGTCG GCTGGCCAGC
GCGCTGCTGC GGGCCAGCGG CGGGTGGCCG TGGCTGGCCC CCGGCCATGA TCCCGGTGGG
GTGCTCGCGC TGCTGGAGGG GGCCGCGGTG CTGGCCGAGA GTGACCCCGC CGCGGGGGCG
CGGGTGCTGA CCGCCCTCGC CGTCGGGCAC TGCTACCACC CCGACGCCGC GGTGTCGGCC
GGGCATCTCG AACGGGCCGC GCGGTTGGCC GAGGCCACCG GGGACCGCGA TGTCATTGCC
GACGTGTTGA TGGGCCGGTT GATCACCTAC TCCGGGGTGG CCGCGTACAG CCATCAGACT
TTGGAGTGGG TCGCGGAACT GAACGCGCTC GGGCACAGCA GGTCCCGGGA GGACTCCGTG
ATCGCGCACT CGGTGGCCAC GATGGCCGCG GTGAACCTGA CCGAGATCGA CCTGGCGAAA
CTGCATCTGC AGGAGGGCAT CTCGGGCAGT GAGGAACTGC GGCTGCCGGT GCTGCGGGCA
CAGCTGCGCT GGATGGAGGC GGTGCTGGCG GTGTGGCGGG GGGACTTCGC CGAAGCCGAA
CGCCACCACC GGATCGCGGC GGAGGTTCAT GAGCAGACCG AATTGTACGA AGCCGGAAGC
GGTTTGATCG CAACGGTGAT TCTGATCCGT GAGAGGGGCG GCCCCGTCGA GCCGGGTTGG
CCGGGCTCGC GTGCCGACAC CGAGAGCGGG GGACAGGGCA TGGTCGGCCT GGTGCACACC
GCTCTGCTCA CCGTGGACAG CGGCGACGAG GCGCGGGCGC AGGCGCTGAT GCGACTGCGG
GAGTGGGACG CCCAACCGCA CCGGGCACAT GTTTGGACGA CGCTCGGGCA CGCGACGCTG
CTGGCCCATC TGGCGTGCGA CCACGGATAC GCCGAGTTCG CCCCCGCGCT GCTGGAGAGG
CTGCTGCCGT TCGTCGACCG CATCGCGGAG ATCGGTCAGG TCGGCGTGGT GGGGCCGGTC
GCCCTGGCGA CCGCGCGTCT GCGGGCGCTG ATGGGCGACA CCGACCGCGC GCTGGCCGAC
CTGGCCGACG CCGAGGACAT CGCCGCGCGC ACCGGGGGTG TTCCCGTCCT ACTGCGGTGC
CGGCTGCTGC GTGCGGAACT GACCCCGCCG GGTGAGCAGC GGAAGGCGGC GGCGCGGGCG
CTCGCCACTG ATGCCGATGC GCTGGGCATG CGCGGCGTGG CCGATTTGGC ACGTCGGCTC
GCGTGA
|
|---|
| Protein sequence | MLGPLQVTHA DCPVDIGPPK QRAVLAVLLL AAGRVVSVDR LIDAVWGDDA PGSATASLQA
YISNLRRALR DAGQSQVASP IVRQPPGYFL NVEPGQVDLA VFASGCARAV AAVDSGDWDA
ALAAADEALA WWRGPLLADL SDEPWVADEA ARAEHLRADC LDARITALLG LGRVPQALAA
AAELRSATPL ADRGCWLHML ALYRAGRVTD ALDVYTRHAR LLDDELGVQP GREVRELQTA
MLRQAPELAA WPRSPEWTGA GAVATPAAPT VEPSVVPAGP SRGALIGRSR ELSTAAGVLS
DVTAGAARWL VLSGPAGIGK TRLAEEVAAR VVADGGDMVW VSCPDERATP PWWPMRQLVR
ALGADPDDVL EVPPDADPDT ARFRVYERIQ TLLESAPRTL AVVIDDVQWA DTTSAACLAY
IAGALRDHAV ALILTVRDGE HSAEVSRLVT TVARGDRNRH VAVPALSTED VAALANQVAD
DPVTEAEAAL LADRTGGNPF FVSEYARLPR ADRVGSEIPV AVKSVLDRRL AGLDPAAVQV
LRTAAIIGDT LDSDAVPVLA QATGMDVDTL ADHLDDAADE RIVIAAHTGD GYAFAHGLLR
DHLIAGIPPL RRQRLHAKIA DVLDGSTAEG ALTRRAQHLI AAQPLVDAGA VVQACRLAAE
DATARWSSDI AAVWWQAALD AYDRLPAASR SEEERDGLTV AMLEAHSRAG RGRLVLDTVA
AQLGDAVRTG RAATAGRLAS ALLRASGGWP WLAPGHDPGG VLALLEGAAV LAESDPAAGA
RVLTALAVGH CYHPDAAVSA GHLERAARLA EATGDRDVIA DVLMGRLITY SGVAAYSHQT
LEWVAELNAL GHSRSREDSV IAHSVATMAA VNLTEIDLAK LHLQEGISGS EELRLPVLRA
QLRWMEAVLA VWRGDFAEAE RHHRIAAEVH EQTELYEAGS GLIATVILIR ERGGPVEPGW
PGSRADTESG GQGMVGLVHT ALLTVDSGDE ARAQALMRLR EWDAQPHRAH VWTTLGHATL
LAHLACDHGY AEFAPALLER LLPFVDRIAE IGQVGVVGPV ALATARLRAL MGDTDRALAD
LADAEDIAAR TGGVPVLLRC RLLRAELTPP GEQRKAAARA LATDADALGM RGVADLARRL
A
|
|---|
| |