| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_3090 |
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| Symbol | |
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| ID | 3921967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanospirillum hungatei JF-1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007796 |
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| Strand | + |
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| Start bp | 3366840 |
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| End bp | 3367820 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637898700 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_504496 |
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| Protein GI | 88604318 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | [TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.196445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.352446 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTTCT TCGACAATAA AACCATACTC ATAACCGGCG GAACCGGATC TTTCGGCAAC
GCGTTCACCT CCCGCCTTCT CAATAACCAT AATCCGCATA GTATCCGGAT CTACTCGCGT
GGAGAATATC TCCAATGGAA GATGCAGCAA AAGTTTTCCG ACAGCCGCAT CAGGTTTTTC
ATTGGTGATA TCCGAGATAA AGCCCGTCTC ACTCGCGCCT TGAATGATGT CGATATCGTG
GTTCACGCAG CAGCGCTTAA ACAGGTTCCA GCATGTGAGT ATAATCCGAT TGAAGCCGTG
AGAACCAACA TCGACGGGAC AACAAACCTT ATAGATACAT CAATTGACAA CAATGTCGAC
CGGCTCATAG CCCTGAGCAC TGACAAGGCT GTTCACCCGG TCAATCTCTA CGGCGCAACA
AAGATGGTAG CGGAGAAACT GTTTATCCAG GGGAATGCAT ATTCAGGTAA GAAAACAACC
CGGTTTTCCT GTGTCAGGTA TGGAAATGTG GTTGGAAGCA GAGGAAGCAT CGTTCCCTTA
TTTAAGATGC AAAAAGAAGA GGGAAAGATT ACTATAACTG ATCCCCGTAT GACCAGGTTC
TGGCTTACCC TGGACCAGGG TGCAGCCTTT GTTGAAAATT GTACCCAGAT TATGAATGGA
GGAGAGATAT TTGTGCCCAA GATCCCCAGC ATGAAGATCA CCGACCTTGC AGAGGCTATA
GCTCCTGGTA TTCCCCATGA GTATATCGGC ATCAGACCTG GAGAAAAGAT CCATGAAGTT
CTTATTACCG AAGATGAAGC CCGCCATACC CGCGATCTTA AAGAATACTA TATTATAGAT
CCGGAGATAT CGTTCTGGAA CGGGCATAGA AAGGATTATT CTTACACACT CCCTGAAGGG
TTCCGGTATT CCAGCGAGAC CAATACCGAA TGGCTGGATG AAGAGGGATT AAAGCAGATG
CTTGCTGAAT CCCACCCATA A
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| Protein sequence | MSFFDNKTIL ITGGTGSFGN AFTSRLLNNH NPHSIRIYSR GEYLQWKMQQ KFSDSRIRFF
IGDIRDKARL TRALNDVDIV VHAAALKQVP ACEYNPIEAV RTNIDGTTNL IDTSIDNNVD
RLIALSTDKA VHPVNLYGAT KMVAEKLFIQ GNAYSGKKTT RFSCVRYGNV VGSRGSIVPL
FKMQKEEGKI TITDPRMTRF WLTLDQGAAF VENCTQIMNG GEIFVPKIPS MKITDLAEAI
APGIPHEYIG IRPGEKIHEV LITEDEARHT RDLKEYYIID PEISFWNGHR KDYSYTLPEG
FRYSSETNTE WLDEEGLKQM LAESHP
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