Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_3080 |
Symbol | |
ID | 3922338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | + |
Start bp | 3354129 |
End bp | 3355130 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637898690 |
Product | NAD-dependent epimerase/dehydratase |
Protein accession | YP_504486 |
Protein GI | 88604308 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.427857 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.378634 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCTC ACATTATTGA AGAGGGTATT GAAAAAATTA TTAATAATAC CAATGATCTT TCATTTGATA ATAAGCGGGT TTTGATAACC GGGGGATCAG GGTTCCTTGG ATCATGGCTT TGTGATGCTC TTATAAGGAA GGGTGCGGAG GTTATCTGTC TGGATAATTA TGCTTCTGGA AGAAAGGAGA ATACCGATCA TCTCTTAGGA GATCCATCTT TTACCAGAGT AGACCATGAT ATTTCTATAC CTTATATTCC GGAAAAACCA GTAGATCTGG TTATGCATCT TGCCTCACGT GCATCTCCTC TTGAATTTAC CGATTATCCC ATCCAGATTT TAAAATCAAA TACAATAGGG ACGATGAATG CCCTTGGAAT TGCAAAAAAT TCGGGTGCAC GGTTTTTGTT CACCTCAACC AGTGAGATAT ATGGTGAGGC ACAGGTTTTT CCCACTCCTG AAACATACCG TGGCAATGTT AATACCTTAG GAATCCGGGG TTGTTATGAC GAGGCAAAAC GGGCGGGAGA GGCTTTTTGT ATGGCGTATC ATCGTCAGCA TCATCTGGAC GTCCGGATAG TCAGAATCTT CAATACCTAT GGCCCACGGA TGAGAAGTGA CGGGCTATAC GGTCGGGTGA TACCCCGTTT TTTGGATCAG GCACAGAAAA ACCAGCCTAT CACCATCTTC GGCGATGGTT CTCAAACCAG GAGTTTCTGT TATGTGACCG ACCAAGTAAC CGGCCTTTTG AAACTGGCCG GATATGATGG GATAGACGGG TCTGTTATTA ATATAGGAAA TCCGTTGGAA ATGTCGGTTC TTTCACTTGC TGAGAAGATC ATTGAGATTA CAGAATCACA GTCATCGATC AGTTATCACC CGCTTCCACC AGATGATCCG TCACGGCGGT TTCCGGATAT TTCCAAAGCT GCAGAGGTAT TGAAATGGAA ACCACAGATA AGCTTGGATT ATGGCCTTCG GGCGATGATT GCAGTGTCGT AA
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Protein sequence | MASHIIEEGI EKIINNTNDL SFDNKRVLIT GGSGFLGSWL CDALIRKGAE VICLDNYASG RKENTDHLLG DPSFTRVDHD ISIPYIPEKP VDLVMHLASR ASPLEFTDYP IQILKSNTIG TMNALGIAKN SGARFLFTST SEIYGEAQVF PTPETYRGNV NTLGIRGCYD EAKRAGEAFC MAYHRQHHLD VRIVRIFNTY GPRMRSDGLY GRVIPRFLDQ AQKNQPITIF GDGSQTRSFC YVTDQVTGLL KLAGYDGIDG SVINIGNPLE MSVLSLAEKI IEITESQSSI SYHPLPPDDP SRRFPDISKA AEVLKWKPQI SLDYGLRAMI AVS
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