| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_2902 |
|---|
| Symbol | rps13p |
|---|
| ID | 3924851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | - |
|---|
| Start bp | 3179944 |
|---|
| End bp | 3180399 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637898515 |
|---|
| Product | 30S ribosomal protein S13P |
|---|
| Protein accession | YP_504313 |
|---|
| Protein GI | 88604135 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03629] archaeal ribosomal protein S13P |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.132412 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAGG ATGACCAGGA GATAAACTAC TTTGTCAGGG TTCATAATAC CGACCTTGAC
GGGACGAAGC CCGTTCTTAT TTCCCTGACC GGTATCAAAG GGGTCGGACG ACATACTGCC
AAGTTCATTG CTGAAACTGC AGGTGTTGAA AAGAACGTAT TGATGGGTAA ACTTGATGAA
GCATCTGTTG ACCGGATCCG TGAAGTTGTC AGTAATTATG CCGACCGGAT TCCAGTCTGG
ATGAGTAACC GCCCCAAGGA CGTCTATACC GGTGTCAAGC GTCATCTGCT CGGAGCAGAT
GTCACGATGA CTGTTGATGA TGACATCAAC CTGCTCAAGA AGATCCGTGC ATACCGCGGC
ATCAGACATG AGACCGGCCA GAAAGTCCGT GGTCAGCGTA CCAAGTCTAC CGGAAGAACC
GGCCTTATCG TCGGTGTGAA GAGAAAGAAA GCCTAG
|
|---|
| Protein sequence | MAQDDQEINY FVRVHNTDLD GTKPVLISLT GIKGVGRHTA KFIAETAGVE KNVLMGKLDE
ASVDRIREVV SNYADRIPVW MSNRPKDVYT GVKRHLLGAD VTMTVDDDIN LLKKIRAYRG
IRHETGQKVR GQRTKSTGRT GLIVGVKRKK A
|
|---|
| |