Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mhun_1778 |
Symbol | |
ID | 3924360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanospirillum hungatei JF-1 |
Kingdom | Archaea |
Replicon accession | NC_007796 |
Strand | - |
Start bp | 2008914 |
End bp | 2009834 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637897398 |
Product | auxin efflux carrier |
Protein accession | YP_503218 |
Protein GI | 88603040 |
COG category | [R] General function prediction only |
COG ID | [COG0679] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACTTTC TTCCGGTTGC AACAAGCATA TTCACCCTTT TTATTCTGAT AGGGGTAGGA TTTCTCGCGT TTCGCATGGG ATATATTACC CGGAGCGGAG CATCAGGACT CTCTTCTCTT CTTGTAAATG TAGCCATACC CTGCCTTATC CTGGAGAGTA TGCAGGTCCC CCTCTCGAGC GGCCTCGTAT ACTCGATGGA AGTCATAGCT CTCATTGAGG TCGTCGTTTA CCTCGTCTCA TTCATCAGTG CCATTGTCAT CCCCTGGTGC CTGACAGGGT CAGTCTTTGA GACCGGAGTC CTGCGGTTCA TGCTCATCTT CTCAAATCTG GGGTTTATGG GGTACCCGGT GGCTTATGCA ATGTTTGGGG AGGAGTCTGT TTTTTATGTC ACTCTTATCA ACCTCCCGTT CGGATTTCTG GTATTTACTC TGGGAGTATT TCTTCTGCGT CCGGATCTTG CACGGAATCC TGATCTGAAA CGGATTTTAA CCCCAGGTCT TATTGCTTCA GTCCTTGGTT TGTGCCTTCT CGGGACCGGT ACCACCATCC CCTCTCCCCT GAATGAATCT GTTTCACTCC TTGGGTCCAT CACAACACCT CTGGCGATGA TCGTCATCGG AACGTTTCTG GCGCCTCTTC CCTTCTTCTC CATGGTATCC GATATCCGGG TATGGATAAT ATCCGCCGCA CGGTTGATTC TGATTCCGGT GATTGTGTTC CTGATAACAT CTCCCTTTGT AACAGATCCG CTCCTTCTGG GCATCCCCGT CCTCCTTGCT GCCATGCCTG TTGCTGCGAA TACGGTGCTG TTGTCAGAAG AGTACGGGGT GAATGCCGAA CTTGCATCAA AAGGAGTATT TATTTCTACT TTACTTTCCC TGGTTACAAT ACCGCTGATT GGGATCTATC TTCTTCCCTG A
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Protein sequence | MDFLPVATSI FTLFILIGVG FLAFRMGYIT RSGASGLSSL LVNVAIPCLI LESMQVPLSS GLVYSMEVIA LIEVVVYLVS FISAIVIPWC LTGSVFETGV LRFMLIFSNL GFMGYPVAYA MFGEESVFYV TLINLPFGFL VFTLGVFLLR PDLARNPDLK RILTPGLIAS VLGLCLLGTG TTIPSPLNES VSLLGSITTP LAMIVIGTFL APLPFFSMVS DIRVWIISAA RLILIPVIVF LITSPFVTDP LLLGIPVLLA AMPVAANTVL LSEEYGVNAE LASKGVFIST LLSLVTIPLI GIYLLP
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