Gene Mhun_1778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1778 
Symbol 
ID3924360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp2008914 
End bp2009834 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content49% 
IMG OID637897398 
Productauxin efflux carrier 
Protein accessionYP_503218 
Protein GI88603040 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTTC TTCCGGTTGC AACAAGCATA TTCACCCTTT TTATTCTGAT AGGGGTAGGA 
TTTCTCGCGT TTCGCATGGG ATATATTACC CGGAGCGGAG CATCAGGACT CTCTTCTCTT
CTTGTAAATG TAGCCATACC CTGCCTTATC CTGGAGAGTA TGCAGGTCCC CCTCTCGAGC
GGCCTCGTAT ACTCGATGGA AGTCATAGCT CTCATTGAGG TCGTCGTTTA CCTCGTCTCA
TTCATCAGTG CCATTGTCAT CCCCTGGTGC CTGACAGGGT CAGTCTTTGA GACCGGAGTC
CTGCGGTTCA TGCTCATCTT CTCAAATCTG GGGTTTATGG GGTACCCGGT GGCTTATGCA
ATGTTTGGGG AGGAGTCTGT TTTTTATGTC ACTCTTATCA ACCTCCCGTT CGGATTTCTG
GTATTTACTC TGGGAGTATT TCTTCTGCGT CCGGATCTTG CACGGAATCC TGATCTGAAA
CGGATTTTAA CCCCAGGTCT TATTGCTTCA GTCCTTGGTT TGTGCCTTCT CGGGACCGGT
ACCACCATCC CCTCTCCCCT GAATGAATCT GTTTCACTCC TTGGGTCCAT CACAACACCT
CTGGCGATGA TCGTCATCGG AACGTTTCTG GCGCCTCTTC CCTTCTTCTC CATGGTATCC
GATATCCGGG TATGGATAAT ATCCGCCGCA CGGTTGATTC TGATTCCGGT GATTGTGTTC
CTGATAACAT CTCCCTTTGT AACAGATCCG CTCCTTCTGG GCATCCCCGT CCTCCTTGCT
GCCATGCCTG TTGCTGCGAA TACGGTGCTG TTGTCAGAAG AGTACGGGGT GAATGCCGAA
CTTGCATCAA AAGGAGTATT TATTTCTACT TTACTTTCCC TGGTTACAAT ACCGCTGATT
GGGATCTATC TTCTTCCCTG A
 
Protein sequence
MDFLPVATSI FTLFILIGVG FLAFRMGYIT RSGASGLSSL LVNVAIPCLI LESMQVPLSS 
GLVYSMEVIA LIEVVVYLVS FISAIVIPWC LTGSVFETGV LRFMLIFSNL GFMGYPVAYA
MFGEESVFYV TLINLPFGFL VFTLGVFLLR PDLARNPDLK RILTPGLIAS VLGLCLLGTG
TTIPSPLNES VSLLGSITTP LAMIVIGTFL APLPFFSMVS DIRVWIISAA RLILIPVIVF
LITSPFVTDP LLLGIPVLLA AMPVAANTVL LSEEYGVNAE LASKGVFIST LLSLVTIPLI
GIYLLP