| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mhun_1109 |
|---|
| Symbol | |
|---|
| ID | 3922142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanospirillum hungatei JF-1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007796 |
|---|
| Strand | + |
|---|
| Start bp | 1251610 |
|---|
| End bp | 1253175 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637896748 |
|---|
| Product | NHL repeat-containing protein |
|---|
| Protein accession | YP_502577 |
|---|
| Protein GI | 88602399 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.607782 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGGC ATACGGCTGG CATCGTCATA CTTCTCATAG CCGGTATTCT GGGCGGTATT
CTCCTTGGAT ATATTTATCA TGGAGATGCA CCAGGACAAA TCCAGAATAA TACATCATGG
GCAAGGCAGG CACCAGTCAG TCAGTCCGAC CTGATACGGC CTTCACATAT CCTGCCCCTT
TCCAATGAGT CATTTTTAGT CAGTGATCTG GATGACAAGG CCCTTTTTCT GGTTCAGGCA
AACGGGACGA TGCAGAGGGT TATAACCAGG GATGTCGCCA AACCCTATGG ATACTGGGAT
ATCGCCGGTT TCACCCATGA TAATAAGGGG AATATATACA TTTCTGATTC AGCAACCCAC
CGGGTATTAA AACTCAGTGA TAAAGGATCT CTTCTTACCA GCTGGGGAGG TTTTGGAGAT
GTGGATGGTA CATTTGACAC GCCGGCAGGG ATCAGTGTTG TTAATGCATC AGGTGAAGAA
TTAATATATG TTTGTGATTC AGGTAATGCA CGAATCCAGG TCTTTACCCC GCAGGGGCAG
TACCTCCAGA GCCTGCAGAT CCCAACCGAT GAAACGAAAA AAGTCAGGAT AATAAAACCC
CAGGAATCAC TCAATACTAC CGACCTGGAG AAATTCATAG TTACTCCGCA AAAAGGAGCA
AATCCTGCAT TTGTAGAGCG CACATTTTCC ATTCAGTCGT CAGGAAATAC CCTATCGCTG
ACGTTTGACA TCAACCGGTC GGTTCATCTG GGTGCACAAA AAGTGTCATT CCAATCATCA
GATGTCTCAA CGAAAAATCC GGAGGAATGG ATTCCGGAGC TTTCTGCTAT CCTTGCAGAT
AAAACAACTC AGGAGACCCT GAAGACAACA TTGGAAGAAC TCAGACGCCA GGCAAATATC
AAAAGAATTA GTGATCGGGC GAAATCGGAA TGTATTGTCC ATTTTATTCA GCAGATTCCT
CTGACTGAGA ATGCAGAGAA CCGGTACCCG ATAGAGATAT TGCATGATAA AATGGGGAAT
ACGTATGACA AAGCCCTGTT TTTATATGGT CTTCTGAGTG AGGCAGGGTA TGATGTCGTT
TATCTCGCAT ACCCGGGTCT TTCTCATGCA GCGGTTGGTA TCCGTCTCAC CGATCCCCTG
CAGAGTACGG CAGTAGCCAC ATACCGGGAT AGCAATGGCA GTATATACAT GTATATCAAT
CCGGATGGGC CATCATTTAT CGGGGGAATT GCCCAGAAAT ACCGGAAGAG TGATCCGTTT
GTGATCCATC TTGAAGAGAA AGGGAAAGAT ATAGGAACGA GAACAGGAAG TGGAAAAGAG
AAGAAGTCCA TCTCTGCAGA TCATCTGTAT TCAACCTATG TCGTGCAGAG TATCTTTTCC
CTCTCTGAAA AGTATCAATT TCTGGTAAAT AAGGAGAAGG ATGTAAAGAG TGATGAGGCA
CGGAAGATCC GGGAGAATTA CCAGAAGATA AAAAGTGTTC TTGACTTTAT CGAGAAAAAT
CCCTGGAACA CCGAGATTGC CTACATGAGA ATTAAAAATT CAAAGGTAAA TGATATTATC
GTGTAG
|
|---|
| Protein sequence | MNRHTAGIVI LLIAGILGGI LLGYIYHGDA PGQIQNNTSW ARQAPVSQSD LIRPSHILPL
SNESFLVSDL DDKALFLVQA NGTMQRVITR DVAKPYGYWD IAGFTHDNKG NIYISDSATH
RVLKLSDKGS LLTSWGGFGD VDGTFDTPAG ISVVNASGEE LIYVCDSGNA RIQVFTPQGQ
YLQSLQIPTD ETKKVRIIKP QESLNTTDLE KFIVTPQKGA NPAFVERTFS IQSSGNTLSL
TFDINRSVHL GAQKVSFQSS DVSTKNPEEW IPELSAILAD KTTQETLKTT LEELRRQANI
KRISDRAKSE CIVHFIQQIP LTENAENRYP IEILHDKMGN TYDKALFLYG LLSEAGYDVV
YLAYPGLSHA AVGIRLTDPL QSTAVATYRD SNGSIYMYIN PDGPSFIGGI AQKYRKSDPF
VIHLEEKGKD IGTRTGSGKE KKSISADHLY STYVVQSIFS LSEKYQFLVN KEKDVKSDEA
RKIRENYQKI KSVLDFIEKN PWNTEIAYMR IKNSKVNDII V
|
|---|
| |