Gene Mhun_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMhun_1029 
Symbol 
ID3924637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanospirillum hungatei JF-1 
KingdomArchaea 
Replicon accessionNC_007796 
Strand
Start bp1160095 
End bp1161102 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content48% 
IMG OID637896667 
Productchorismate synthase 
Protein accessionYP_502498 
Protein GI88602320 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.979791 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCT TTGGTCGGAA TTTTCGGGTT ACCACATTTG GTGAGAGTCA TGGAGCAGCA 
ATTGGTGTGG TTATTGATGG ATGTCCTCCC GGCTTTGCAA TTTCTGAAAA CGAAATTCAG
TATTATCTTG ATAAAAGAAA ACCAGGACAG AGTGATTTCG TAACTCCACG AAAAGAAGCA
GATGCAGTGC AGATCCTCTC CGGAGTGTTT CAAGGATATA CTCTTGGCAC TCCCATCTGC
CTTCTTATTC AGAACACTTC AATGAAATCT GCAGATTATG ATGAATTACA AGAGATATTT
CGTCCAGGTC ATGCAGATCG GGGGTATTTT GAAAAGTATG GAATACGGGA TCATCGTGGC
GGAGGGCGGA GCTCAGGCAG GGAGACTGCT GCACGGGTAG CAGCGGGTGC TATAGCCAGA
CGGTATCTTG AGAAAGAAGG CATCATTATC TCCGGTTCCC TGACTTCTGT TCATGGTGAA
GAAGTTCCTG AAAGAATGGA ACAGGTTATC CGTGACGCGA GGGATCAGGG AGAGTCTGTT
GGTGGCGTGG TCAGTCTTGT GGTATCAGGA TGTCCGCCTG GTCTTGGTGA CCCGGTATTT
GGAAAACTCG ATGCTCTCAT CGCCTATGCG ATGATGGGTA TCGGCGGCGT TAAAGCAGTG
GAGATCGGAT CAGGTGTAAT GGCTGCATCA ATGACTGGTT CGGAACACAA TGATCAGATA
ACTTCCGAGG GATATCTTTC AAATAATGCT GGAGGTATTT TAGGGGGGAT CTCATCAGGA
CAGGATATCC TCGTACGACT CAGTATCAAA CCGACCCCGT CTATCAGGAC TCTTCAGCAG
ACGGTGGATA CGAATGGCAT GGAACGGAAG ATTTCAGTTA AAGGAAGGCA TGATCCCTGT
ATTGCGGTTA GGATTGTGCC GGTGGCTGAA GCGATGATGG CACTGGTTCT CATGGATGCC
CTTCTGGAGC AGAGAAAGAT CATCCCAGAT TGCAGACAGG AGCCATGA
 
Protein sequence
MNTFGRNFRV TTFGESHGAA IGVVIDGCPP GFAISENEIQ YYLDKRKPGQ SDFVTPRKEA 
DAVQILSGVF QGYTLGTPIC LLIQNTSMKS ADYDELQEIF RPGHADRGYF EKYGIRDHRG
GGRSSGRETA ARVAAGAIAR RYLEKEGIII SGSLTSVHGE EVPERMEQVI RDARDQGESV
GGVVSLVVSG CPPGLGDPVF GKLDALIAYA MMGIGGVKAV EIGSGVMAAS MTGSEHNDQI
TSEGYLSNNA GGILGGISSG QDILVRLSIK PTPSIRTLQQ TVDTNGMERK ISVKGRHDPC
IAVRIVPVAE AMMALVLMDA LLEQRKIIPD CRQEP