Gene Mflv_4421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4421 
Symbol 
ID4975734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4703239 
End bp4704219 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content71% 
IMG OID640458649 
ProductDNA primase, small subunit 
Protein accessionYP_001135678 
Protein GI145225000 
COG category[L] Replication, recombination and repair 
COG ID[COG3285] Predicted eukaryotic-type DNA primase 
TIGRFAM ID[TIGR02778] DNA polymerase LigD, polymerase domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.569528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACCA GCGAGAACCG TGACGGCGTC GACCTGACCA ACCTCGATCA GCCGCTGTCC 
GACGATGCGG ACGCCACCAA ACGCGACCTC GTCGACTATC TCGACGCGGT CGCCGACCGC
ATCCTGCCGG TGCTGGCCGG ACGACCGCTC ACCGTGCTGC GGGCACTTCG CGGGCGGGCG
CCGTTCATGC AGAAGAACGT GCCGAAGTAC ACCCCGGATT GGGTTCGGAC AGTGCCGATC
TGGGCCGAGG CGTCCAGACG CGAGATCCGC TACGCCGTCT GCGACGACCG CCGCACCCTG
CTGTGGCTGG CCAACCAGCG CGCCGTCGAA TACCACCCCG CGCTCGGTCC GGCCGACGAC
GTCTACCGGC CCACGCACCT TATCCTCGAT CTCGATCCGC CCGACGACGG TGACTTCGCC
TCCGTCGTCG CCGTGGCGCA CCTGGTACGC CGGGCGCTCG CGGACTGCGG ACTGGACGGT
GCGGTGAAGA CCAGCGGTTC CCGCGGTCTG CACGTCTTCG TCCCCATCGA CGACAGCGCC
CCCGTCGACG ACGTCGCCGC GGCGACCCGT GCGCTGGCCG CCCGCACCGA GGCCCTCGAT
CCGACTGTCG CGACGACGGC GTTCATCGTC GCCGACCGCG CGGGCAAGGT ATTCGTCGAT
GCCACCCGCG CCGGCGGCGC GACGGTGGCC GCCGCCTACA GCCCCCGGTT GCGGCCCGGC
ACGCCGGTGT CGTTCCCGGT GGCATGGGAC GCCCTGGATC GGATACACCC GTCGGATTTC
ACCGTGCGCA CCGCGGTCTC CGCGCTCGCC GGACGCGACC CCTGGGCCGA CGCGATGCCC
GCGCCCACAC GTCTGCCGAC CGACCTGATC GAGCAGGGCC GCGCCATCCC GGTGGCCAGG
GTCGCGGCGA TGCACGAGGG AAAACGGCGC GCGAGGGCCA GGCGGAAAGA CGATGAAGCA
GGTGCGGATC AGACGGGTTA G
 
Protein sequence
MGTSENRDGV DLTNLDQPLS DDADATKRDL VDYLDAVADR ILPVLAGRPL TVLRALRGRA 
PFMQKNVPKY TPDWVRTVPI WAEASRREIR YAVCDDRRTL LWLANQRAVE YHPALGPADD
VYRPTHLILD LDPPDDGDFA SVVAVAHLVR RALADCGLDG AVKTSGSRGL HVFVPIDDSA
PVDDVAAATR ALAARTEALD PTVATTAFIV ADRAGKVFVD ATRAGGATVA AAYSPRLRPG
TPVSFPVAWD ALDRIHPSDF TVRTAVSALA GRDPWADAMP APTRLPTDLI EQGRAIPVAR
VAAMHEGKRR ARARRKDDEA GADQTG