| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4418 |
|---|
| Symbol | |
|---|
| ID | 4975731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 4697006 |
|---|
| End bp | 4699852 |
|---|
| Gene Length | 2847 bp |
|---|
| Protein Length | 948 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640458646 |
|---|
| Product | transport protein |
|---|
| Protein accession | YP_001135675 |
|---|
| Protein GI | 145224997 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
|---|
| TIGRFAM ID | [TIGR00833] Transport protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.063936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.179465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGATG CCGGACGGTC GGGGATCGGC AGGATCATCC GTGTCCTGGC GGTGCCGATC
GTGCTCGGAT GGGTGCTGCT GACCGTCCTG ACCAACGTCG CGGTCCCGTC GCTGGAGAAG
GTCGGCGAGG AACACACCGT CGGGATGAGC GCCGGTGACG CGCCGTCGAT GATGTCGATG
AAACGGGTCG GCGCGAACTT CGAGGAATTC GACTCCGACA GCAGCGCGAT GGTCGTGCTC
GAAGGCGAAC AACCGCTCGG CGACGCCGCG CACCGCTATT ACGACCAGCT CATCGACGAA
CTCGAGGCCG ACACCGCCAA CGTCCAGCAC ATCGCCGACT TCTGGGGCGA TCCGCTGACC
GCGTCGGGCG CGCAGAGCAC CGACGGCAAG GCCGCCTATG TGCAGGTCTA CCTGCAGGGC
AATCAGGGCG AGCCGCGCGC CAACGAGGCG GTGGCCGCCG TCCGCGAGAT CGTCGACCGG
ACACCGGCGC CGCCGGGCAT CAAGGCGTAC GTGACCGGTG GCGCCCCGCT GGTCGCCGAT
CAGCACAGCG CCGGCGACAC GAGCGTCCTG CGCGTCACGC TGATCACGAT CGGCGTCATC
GCGGTGATGC TGCTGATCGT CTTCCGGTCG GTGGCCACCA TGGTGCTGAT CCTGTTCATG
GTGTTCGCCG AGCTCGGCGC TGCCCGCGGC ATCGTCGCGT TCCTCGCCGA CGCCGAGATC
ATCGGGTTGT CGACGTTCGC GACCAGCCTC CTGACGTTGA TGGTGATCGC CGCCGGCACC
GACTACGCGA TCTTCGCGAT CGGCCGGTAC CAGGAGGCCC GGGGCGCGGG GGAGGACCGG
GAAACCGCGT ACTACACCAT GTTCCGTGGC ACTGCGCACG TCGTGCTCGG CTCCGGCCTG
ACCATCGCCG GGGCGATGTT GTGCCTGAGC TTCACCCGGC TGCCCTACTT CCAGACCATG
GGGGTGCCCT GCGCGGTCGG CACGTTCGTC GCGGTCATCG CGGCGCTGAC CCTGGGTCCC
GCGGTGATCG TGATCGGCAG CCGCTTCGGC CTGTTCGACC CCAAGCGCGC CATCAGCTCG
CGCGGCTGGC GACGCATCGG CGTCTCGGTG GTGCGGTGGC CGGGCCCGGT GCTCGCCGCG
ACGCTGGCCC TGGCGCTGGT CGGGCTCGTG ACGCTGCCGG GCTACAAGAC CAACTACGAC
GCCCGCGACT ACCTGCCCGA GGACATCCCC GCCAATGTCG GCTACGCCGT CGCCGACCAG
CACTTCGGCA GCGCCCGGAT GAACCCCGAA CTGCTGATGG TCGAAAGCGA CCACGATCTG
CGCAACCCCG CGGATTTTCT CGTCATCGAC AAGATCGCCA AGTCCGTCTT CCGGGTGCCC
GGGGTGGCGC GGGTGCAGAC GATCACCCGC CCCGACGGCA AACCGATCAA GCACACGACC
ATCCCGTTCC AGATGAGCAT GCAGGGCACG ACCCAGCGGC TCAACGAGAA GTACCTGCAG
GACCGGATGG CCGACATGCT CGTGCAGGCC GACGCGATGC AGACCAACGT CGACACGATG
ACCCGGATGC AGAGCCTGAT GGGTCAGATG TCGGCCACCA CGCACGAGAT GGTCCTCAAG
ACGAAGAAGA CGGAGATCGA CATCATCGAG GTGCGCGACA ACCTCGCCGA CTTCGACGAC
TTCTTCCGGC CCGTCCGCAA CTACTTCTAC TGGGAGCCGC ATTGTTACGA CATCCCGGTG
TGCTGGACCA TGAGGTCGGT GTTCGACACC CTCGACGGCA TCAACCCGCT GACCGACGAC
ATCTCCGAGC TGATCCCCGA CCTCGAACGC CTCGATGAGC TGATGCCGCA GCTGATCGCG
TTGCTGCCCA GCCAGATCGA GACGATGCGG TCCATGCAGG CGATGATGCT GCGGCAGTAC
CAGACCCAGA AGGGTCAGCT CGATCAGAAC GCGGCGATGT CCGAGGACGC CGACGCGATG
GGCGAGGCGT TCGACGACTC GATGAACGAC GACTCCTTCT ACCTGCCGCC CGAAGCGTTC
GACAACGACG ACTTCAAGCG CGGCATGGAG AATTTCATCT CGCCCGACGG CAGGTCGGTG
CGGTTCATCA TCAGCCACGA AGGCGATCCC GCCACGGTGG AGGGCATCTC GGAAGTAGTG
CCGATCAAGA CCGCGGCCAA GGAGGCCATC AAGGGCACGC CGCTGGAAGG GTCCACCGTC
TACCTGGCCG GCACCGCGGC GACGTACAAG GACATGAGCG ACGGGGCGTT CTACGACCTG
CTGATCGCCG GAATCGCCGC GGTGACACTG ATTTTCGTCA TCATGCTGGT GATCACCCGC
AGCGTCGTCG CCGCAGCGGT GATCGTCGGC ACCGTGCTGT TGTCGCTGGG AGCCTCGTTC
GGTCTGTCGG TGTTGTTGTG GCAGCACATC ATCGGGCTCG CACTGCACTG GATGGTGCTG
CCGATGGCGG TCATTCTGCT GCTCGCCGTC GGCTCCGATT ACAACCTGCT GCTGGTGTCG
CGGTTCAAGG AGGAGCTCTC CGGGGGGCTG AAGACGGGAA TCATCCGCGC GATGGCCGGC
ACCGGGTCGG TGGTCACCTC CGCCGGACTG GTCTTCGCGT TCACGATGGC GTCCTTCGCC
TTCAGCGATC TGAAGGTGAT GGCGCAGGTC GGAACGACGA TCGCGCTGGG GCTTCTGTTC
GACACGCTGA TCGTGCGCTC GTTCATGACC CCTGCGGTGG CCGCACTGCT CGGGCGGTGG
TTCTGGTGGC CGCAGAAGTT CCGGAGCGCG GCGTCGGAGC GGCGCCTCGC CCGGATCGGG
GTGCAGCCGG CTACCGCGGG TCGCTGA
|
|---|
| Protein sequence | MADAGRSGIG RIIRVLAVPI VLGWVLLTVL TNVAVPSLEK VGEEHTVGMS AGDAPSMMSM
KRVGANFEEF DSDSSAMVVL EGEQPLGDAA HRYYDQLIDE LEADTANVQH IADFWGDPLT
ASGAQSTDGK AAYVQVYLQG NQGEPRANEA VAAVREIVDR TPAPPGIKAY VTGGAPLVAD
QHSAGDTSVL RVTLITIGVI AVMLLIVFRS VATMVLILFM VFAELGAARG IVAFLADAEI
IGLSTFATSL LTLMVIAAGT DYAIFAIGRY QEARGAGEDR ETAYYTMFRG TAHVVLGSGL
TIAGAMLCLS FTRLPYFQTM GVPCAVGTFV AVIAALTLGP AVIVIGSRFG LFDPKRAISS
RGWRRIGVSV VRWPGPVLAA TLALALVGLV TLPGYKTNYD ARDYLPEDIP ANVGYAVADQ
HFGSARMNPE LLMVESDHDL RNPADFLVID KIAKSVFRVP GVARVQTITR PDGKPIKHTT
IPFQMSMQGT TQRLNEKYLQ DRMADMLVQA DAMQTNVDTM TRMQSLMGQM SATTHEMVLK
TKKTEIDIIE VRDNLADFDD FFRPVRNYFY WEPHCYDIPV CWTMRSVFDT LDGINPLTDD
ISELIPDLER LDELMPQLIA LLPSQIETMR SMQAMMLRQY QTQKGQLDQN AAMSEDADAM
GEAFDDSMND DSFYLPPEAF DNDDFKRGME NFISPDGRSV RFIISHEGDP ATVEGISEVV
PIKTAAKEAI KGTPLEGSTV YLAGTAATYK DMSDGAFYDL LIAGIAAVTL IFVIMLVITR
SVVAAAVIVG TVLLSLGASF GLSVLLWQHI IGLALHWMVL PMAVILLLAV GSDYNLLLVS
RFKEELSGGL KTGIIRAMAG TGSVVTSAGL VFAFTMASFA FSDLKVMAQV GTTIALGLLF
DTLIVRSFMT PAVAALLGRW FWWPQKFRSA ASERRLARIG VQPATAGR
|
|---|
| |