Gene Mflv_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3578 
Symbol 
ID4974896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3815119 
End bp3816933 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content72% 
IMG OID640457804 
Producthypothetical protein 
Protein accessionYP_001134840 
Protein GI145224162 
COG category[S] Function unknown 
COG ID[COG5373] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.214461 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0454091 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGACA TGACCGAACC GCACTCCGCC GTCATCGCCC GGCTCTCCGC GGATTTCGCC 
GCGATCTCCC ACCAGCTCAC TCGCGTCTCC GGCGATCTCG CCGCGCTCGA CCGGATCCTC
ACCGACCGGG CGCCGGCCGC TGCGGCGCCT CGGCCGGCGC CCCAGCCCGC TGCGTACTGG
CCGCAGTATC CGCCGCAGCC CGCCCCGTTC CGGCCGTGGC CACAGGCGCC GGCACCGGCA
CCGACACAGG CACTGACACC GGCACCGCGC AAGGAACGTT CGGAGGGTTG GATCGGCAAG
CTGCTGGCCG TCGCCGGTGT CGCGGTCACC CTGATCGGCG TGGTCCTGCT TCTGGTGCTC
GCCGCGCAGG CCGGCATCCT GCGCCCCGAG TTCCGGGTCT CGGCCGGCGG CGCGCTGGCC
GCCGCGCTGG TGGGTGCGGG ATGGTGGCTC AACACCCGGC CAGGCGGCAG GGTCGGGGCG
ATCGCGCTGG TGGCGACCGG TGTCGCCGCG GCCTACATGG ACGTCATCGC GGTCACGACG
ATCTACGACT GGGTGCCGGC GCCGGCCGGA CTCGTGCTCG CCGCGGTGAT CGCCGGCGCG
GGGCTGACGC TGGCCCGCAG ATGGGACTCC GAGCATCTCG GGCTCCTGGT GCTGGTGCCG
CTGATCGTCT TGGCCCCGAT CGTCACGGAC GGGGTGTCCC TGCTGCTGGT CGGGTTCATG
CTGGCGCTGG CGGCGGTGTC GCTACCGGTG CAGCTCGGCA AGGACTGGAT CTGGCTGCAT
GCCGCGCGGA TCGCGGCGGC CGTGCTGCCG CTGCTGGTGG CGCTGGCGGC CCGTCACATC
GACTCGCGAG AGGACCTCTG GCTGGCCGGC GCATGCGGCA TCGCCGCGGT CATCGCGTTG
ACCGCCGCGC TGATCCTGTT GCCCGGGACC GGGAATCGGG TCGTGATGGC CCTGTTGACG
GTGGCCGGGA TCGTGCCGGT GTTGTGCGTG AACCTCGCGG TGGACCGCGT CGTCGCCGCG
TTGATGGCCG CCGCACTGGC CGCTGCGTTG CTCGCGGTGG CCCTGCTCGC TGACCGCCTT
CCGGGGGTCG ACGGAGTCGT TCGTCGCGTG TTCGCCGTGA CATCGGCGAT CGCTGCGCTG
ATCGCGGTGA CGACCGCGTT CGACGGCAGG GTCGGCGGAC CCGTGCTGCT GGCGATGGCG
GTCGTGGTCG CCATCGCGGT GGGACGGGAT GTCGTCGGTC GTTGGGTGGC AATCGGATTC
GCCGTCATCG GCGCCGCCGC CCACCTGAGC TACGCACCGC TCGCCGTACT GCTCCAACCG
GTCGAGGTCA GCACCGCCAC CGGGATCTCG ACCCTGGTCT CCAGCCTGCT GCTGGCCACC
GCCGCGGTCA CGATCGTGTG GATGTGGGAC CGCACCGAGA CCGCGCTGTG GGTCGGTGCG
GCGGTGGTGA CGGTCTACGC CGTCACGTCG TGCACGGTGA CCGCGGGCAT GCTCGTCATC
GGGGGTGACG GCGGGTTCTA CGCCGGTCAC ATGGTCGCGA CGATCCTCTG GATCGCGATG
GCCGCCGTGC TGTTCTGGTA TGCCGCACGG TTGCCGCGCG AGGACCGGTC GGTGCCCCTG
GGCGGCGGTC TGGGTCTGGT GGCGGCCGCG ATGGCCAAGC TGTTCCTGTT CGACCTGGGG
ACTCTCGACG GCATCTTCCG GGTCGTCGTG TTCATCGTCG TCGGACTGAC CCTGCTCGGC
ATCGGCGCGG GGTATGCCCG CTTGCTCGAG CGCCAGGACA AGCAGGCCGC GACCAGGACA
TTTGACACCA CATGA
 
Protein sequence
MADMTEPHSA VIARLSADFA AISHQLTRVS GDLAALDRIL TDRAPAAAAP RPAPQPAAYW 
PQYPPQPAPF RPWPQAPAPA PTQALTPAPR KERSEGWIGK LLAVAGVAVT LIGVVLLLVL
AAQAGILRPE FRVSAGGALA AALVGAGWWL NTRPGGRVGA IALVATGVAA AYMDVIAVTT
IYDWVPAPAG LVLAAVIAGA GLTLARRWDS EHLGLLVLVP LIVLAPIVTD GVSLLLVGFM
LALAAVSLPV QLGKDWIWLH AARIAAAVLP LLVALAARHI DSREDLWLAG ACGIAAVIAL
TAALILLPGT GNRVVMALLT VAGIVPVLCV NLAVDRVVAA LMAAALAAAL LAVALLADRL
PGVDGVVRRV FAVTSAIAAL IAVTTAFDGR VGGPVLLAMA VVVAIAVGRD VVGRWVAIGF
AVIGAAAHLS YAPLAVLLQP VEVSTATGIS TLVSSLLLAT AAVTIVWMWD RTETALWVGA
AVVTVYAVTS CTVTAGMLVI GGDGGFYAGH MVATILWIAM AAVLFWYAAR LPREDRSVPL
GGGLGLVAAA MAKLFLFDLG TLDGIFRVVV FIVVGLTLLG IGAGYARLLE RQDKQAATRT
FDTT