| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1848 |
|---|
| Symbol | |
|---|
| ID | 4973172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 1919280 |
|---|
| End bp | 1920395 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640456056 |
|---|
| Product | polyprenyl synthetase |
|---|
| Protein accession | YP_001133116 |
|---|
| Protein GI | 145222438 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGACGG TCAACGGCTA CGCGACGTCG ACCTTTACGG CCACCGGTAT CGCCTCGCGC
CACGACCTGA AATGGCATTC TCGACTTCGT GACCGCGTGC TGGCCGCCAT CACCGAGTTC
GTCGACGCGC GCTGCGCCGA CGCGCTGGCG GGCGGACCGG TCGATGTCGC CGAGGACGTG
TTGCGAGGTC TGCTCGCCGA CGGCAAGTGC CTGCGGTCGA CATTCCTCTA CGTGGGCTGG
CGGTGCGGTG CCGACGGAAC GGATGCGGCC ATCCGGGCGG CGGCCAGCCT GGAGTTCCTG
CACGCGTTCG CTCTGATGCA GGACGACGTG ATGGACGAGT CCCCGATGCG CCGCGGACGG
CCCACCGCGC ACCGGGCGTT CGCCAATTGG CACCACGCCA ACGGACTGTC GGGCTCGTCG
ACGCGGTTCG GCGAATCCGC CGCGGTGCTG CTGGCCGACC TGTGCCTGGT GTGGGCCGAG
CAGATGCTGC GCGAGAGCGG AGTGGACGCG GCGGCACTCG ATCGTGCCTG GCCCCGCTAC
GACACGATGC GCACCGAGCT GGCCGTCGGC CAGTTCGCCG ACCTCGTCAA CGACACCGCC
ACGTTCCCGT CACTGGACGC CGTGCTCGAC GTCGCCCGCC GCAAGTCCGG TAACTACACG
GTGCGACGCC CGCTCGAGAT CGGCGCCACG CTGGCCGGAT GCGACGAGCG GCAGCTCAGC
GCGCTGGCCG GGTACGGCAG CGCGGTCGGC GAGGCGTTCC AGATGCGCGA CGACCTGCTG
GGGGTGTTCG GCTCCCCCGA GACCACCGGC AAACCGGCGG GCGACGATCT CGCCGCCCGC
AAGGCGACCT CCGTGGTCGC CGCGTCCTAC CAACTGGCCA ACGACACCCA GCGTCGGCGC
CTCGGCGCGC TGATGACCGG AGGTCACCTC ACCCCGGCCG ACATCACCCA CTGGCAGAAC
CTGATCGCCG AGACCGGCGC AGTCGAATGG ATTGAAGAGT TGATCGAACG ACGGCTCACC
TGGGCCCTGG ACAGTCTGGA CACCGCGGAC TTCGACGGCG AGGCGCGCGA TGCGCTCGCC
ACGATGGCAG CGGCCTGCAC CGAGAGGGTG GCGTGA
|
|---|
| Protein sequence | MRTVNGYATS TFTATGIASR HDLKWHSRLR DRVLAAITEF VDARCADALA GGPVDVAEDV
LRGLLADGKC LRSTFLYVGW RCGADGTDAA IRAAASLEFL HAFALMQDDV MDESPMRRGR
PTAHRAFANW HHANGLSGSS TRFGESAAVL LADLCLVWAE QMLRESGVDA AALDRAWPRY
DTMRTELAVG QFADLVNDTA TFPSLDAVLD VARRKSGNYT VRRPLEIGAT LAGCDERQLS
ALAGYGSAVG EAFQMRDDLL GVFGSPETTG KPAGDDLAAR KATSVVAASY QLANDTQRRR
LGALMTGGHL TPADITHWQN LIAETGAVEW IEELIERRLT WALDSLDTAD FDGEARDALA
TMAAACTERV A
|
|---|
| |