Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_1796 |
Symbol | |
ID | 4973120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | + |
Start bp | 1869472 |
End bp | 1871187 |
Gene Length | 1716 bp |
Protein Length | 571 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640456003 |
Product | thiamine pyrophosphate enzyme, central region |
Protein accession | YP_001133064 |
Protein GI | 145222386 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.597233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGTTC CCGTATACAA ACGCATTCTC GACCTGTTCG AGGCCGAGGG CGTCAACACG CTGTTCGGCA TCCCCGACCC GAATTTCGTG CACATGTTCA CCGAGGCCGA CGCCCGCGGG TGGTCGGTCG TCGCACCGCA CCACGAACTG AGCGCCGGTT TCATGGCCGA GGCGGCATCA CGGATGACGG GTGGTCCGGG CCTGTGCATC GGCACGCTCG GCCCCGGTGT GGCCAACATC GCCGGCGCCA TGATGTGCGC ACTGGTGGAG AACTCTCCGG TGATCTTCCT CGGCGGCCAG CGGGCGCGCG TCACCGAACG ACGGGTACGG CGCGGACGCA TCCAGTTCGT CCAGCAGGAA GGGCTTTTCG CGCCGTCGGT CAAGTACAGC AGCTCGATCG AGTACGCCGA TCAGACCGAC GAGATCATCC GCGAAGCCAT CCGCCGGTCG ATGTCGGGAA CCCCCGGCCC CAGCTACGTC GAGTTCCCGT CGCACGTGAT CCTCGAAGAG CTCGACGTCG CCGATCCGCT GCCCCCCGAG CGGTACCGCC TCGTCAACCA GGGCGCCGGG GAGCGGGAGA TCGCCGAGGC GGCCCGCCTG ATCCGTGCCG CCGAGCGCCC GATCCTGTTG GTGGGCCACG GCGTTCACAC GTCGCGCACC CAGCAGCAGG TCAGGGAGCT CGCCGAGTTG ATGGCCTGCC CGGTCATCCA GACCTCCGGC GGCACGTCGT TCATCCCCGG CCTGCAGGAC CGCACCTTCC CGTACCTGTT CTCCCCGGCC GCCAACGAGG CCGTCGAGCA GTCCGACCTG TGTGTGGCGC TGGGCACCGA GCTCGGCGAA CCCATGCACT ACGGCCGCAC CCAGCACTGG GCGGGCAACG ACGCCAACCG CAAATGGATT CTGGTGGAAC AGGATCCGAC TGCGATTGGT GTGAACCGGC CGATCGACGT GCCGTTGGTC GGCGACCTGC GCGGCGTGGT GCCGCAGCTC GTCGACGCCC TGCGCGACAC CCCGCGCGCA CCGTCGGCGA ACCTCGACTC CCTGGTGAAG GCCGATGCCG CGGAGCTGGC CAGGGTGGCC GAGGAGGCGC CGAGCGGGCG CGCCCCGGTG CATCCGGCGC GCTACGTCGT CGAGGCGACC AAGGCGTTCA ACGAGCACAC CGAGGACGGC ATCCTGGTCC GCGACGGTGG CGCGACGGTG ATCTTCCAGT GGACCTACTC GCAGGTGAAG CCGCGCGACG TGATCTGGAA TCAGAACTTC GGCCACCTGG GCACCGGCCT GCCCTACGCC GTCGGCGCAT CCGTCGCCGA GGGCCGCAAG CGGCCGGTCA TGCTCCTGAC CAGTGACTCG GCGTTCCTGT TCCACATCGC CGAACTCGAA ACCGCGGTGC GAGAGAACCT GCCGCTGGTC TGCGTCGTCG GCGTCGACCA TCAGTGGGGG CTCGAAGTCG GGGTGTACAA GCGCACGTTC GAGCAGCCCT CACCGCAACC CGGCGTGCAC TGGAGCAAGG ACGTCCGGAT GGACAAGATC GCCGAGGGGT TCGGCTGCCA CGGCGAATAC GTCGAGAAGG AAGACGAGAT CGGCCCCGCG ATCCAGCGCG CGTTCGCCAG CGGCAAGACC GCCGTCGTCC ACGTCTGCAT CGACCCGAAG GCCAACTCCG AGGAGATGCC CAAGTACGAC CGATTCCGGA CCTGGTATGC AGAAGGCACC CAGTAG
|
Protein sequence | MGVPVYKRIL DLFEAEGVNT LFGIPDPNFV HMFTEADARG WSVVAPHHEL SAGFMAEAAS RMTGGPGLCI GTLGPGVANI AGAMMCALVE NSPVIFLGGQ RARVTERRVR RGRIQFVQQE GLFAPSVKYS SSIEYADQTD EIIREAIRRS MSGTPGPSYV EFPSHVILEE LDVADPLPPE RYRLVNQGAG EREIAEAARL IRAAERPILL VGHGVHTSRT QQQVRELAEL MACPVIQTSG GTSFIPGLQD RTFPYLFSPA ANEAVEQSDL CVALGTELGE PMHYGRTQHW AGNDANRKWI LVEQDPTAIG VNRPIDVPLV GDLRGVVPQL VDALRDTPRA PSANLDSLVK ADAAELARVA EEAPSGRAPV HPARYVVEAT KAFNEHTEDG ILVRDGGATV IFQWTYSQVK PRDVIWNQNF GHLGTGLPYA VGASVAEGRK RPVMLLTSDS AFLFHIAELE TAVRENLPLV CVVGVDHQWG LEVGVYKRTF EQPSPQPGVH WSKDVRMDKI AEGFGCHGEY VEKEDEIGPA IQRAFASGKT AVVHVCIDPK ANSEEMPKYD RFRTWYAEGT Q
|
| |